Panicum virgatum (switchgrass): 120696232
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Entry
120696232 CDS
T07260
Name
(RefSeq) SKP1-like protein 1
KO
K03094
S-phase kinase-associated protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
pvir04120
Ubiquitin mediated proteolysis
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120696232
04120 Ubiquitin mediated proteolysis
120696232
09126 Chromosome
03083 Polycomb repressive complex
120696232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120696232
04121 Ubiquitin system [BR:
pvir04121
]
120696232
03036 Chromosome and associated proteins [BR:
pvir03036
]
120696232
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
120696232
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
120696232
Cul7 complex
120696232
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120696232
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
120696232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
120696232
NCBI-ProteinID:
XP_039835295
LinkDB
All DBs
Position
2K:64684983..64686057
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AA seq
212 aa
AA seq
DB search
MAGEGEKRGAMEAEKGEVEKRGDVAAALEEGKGVAEAKEVAGGKMVILWSSLPEKKRYDV
PEAAARLSVILGHMLDGCANGDDVVLPVASRTLDTVFEYCSKHAEATKSDSDPNPSAEAS
VGGVNTAASENLEDWDRNLVDRLSTDDLYDVIHAANFLEIKGLLDVVYQRAADMIKGKTH
DEIRATFSIANDFTQEEEDELREQYAWIFDRE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggagggagagaagaggggagcgatggaggcagagaagggagaggtggagaag
agaggggatgttgcggcggcgttggaggaggggaagggagtggcggaagcgaaggaggtg
gccggcggtaagatggtcatcctgtggagctcgctgccggagaagaagcggtacgatgtc
ccggaggcggcggcgcggctgtcggtgatcctcggacatatgctcgacgggtgcgccaat
ggcgacgacgtcgttctccctgtcgcctccaggaccctggacacagtgttcgagtactgc
agcaagcacgccgaggctaccaagtccgactccgaccccaaccccagcgccgaggccagt
gtcggcggcgtcaacacggcggcgtccgagaacctggaggattgggaccgcaacctcgtc
gaccgcctcagcacggacgacctctacgacgtcatccacgccgccaacttcctcgagatc
aaggggctcctcgacgtcgtctaccagagggccgccgacatgatcaagggcaagacccac
gacgagatccgcgccaccttcagcatcgccaacgacttcacccaggaggaggaggacgag
ttgcgcgagcagtacgcctggatcttcgaccgcgagtag
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integrated database retrieval system