KEGG   Panicum virgatum (switchgrass): 120696232
Entry
120696232         CDS       T07260                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03083  Polycomb repressive complex
pvir04120  Ubiquitin mediated proteolysis
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120696232
   04120 Ubiquitin mediated proteolysis
    120696232
  09126 Chromosome
   03083 Polycomb repressive complex
    120696232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120696232
   04121 Ubiquitin system [BR:pvir04121]
    120696232
   03036 Chromosome and associated proteins [BR:pvir03036]
    120696232
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    120696232
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     120696232
   Cul7 complex
     120696232
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     120696232
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     120696232
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 120696232
NCBI-ProteinID: XP_039835295
LinkDB
Position
2K:64684983..64686057
AA seq 212 aa
MAGEGEKRGAMEAEKGEVEKRGDVAAALEEGKGVAEAKEVAGGKMVILWSSLPEKKRYDV
PEAAARLSVILGHMLDGCANGDDVVLPVASRTLDTVFEYCSKHAEATKSDSDPNPSAEAS
VGGVNTAASENLEDWDRNLVDRLSTDDLYDVIHAANFLEIKGLLDVVYQRAADMIKGKTH
DEIRATFSIANDFTQEEEDELREQYAWIFDRE
NT seq 639 nt   +upstreamnt  +downstreamnt
atggcgggggagggagagaagaggggagcgatggaggcagagaagggagaggtggagaag
agaggggatgttgcggcggcgttggaggaggggaagggagtggcggaagcgaaggaggtg
gccggcggtaagatggtcatcctgtggagctcgctgccggagaagaagcggtacgatgtc
ccggaggcggcggcgcggctgtcggtgatcctcggacatatgctcgacgggtgcgccaat
ggcgacgacgtcgttctccctgtcgcctccaggaccctggacacagtgttcgagtactgc
agcaagcacgccgaggctaccaagtccgactccgaccccaaccccagcgccgaggccagt
gtcggcggcgtcaacacggcggcgtccgagaacctggaggattgggaccgcaacctcgtc
gaccgcctcagcacggacgacctctacgacgtcatccacgccgccaacttcctcgagatc
aaggggctcctcgacgtcgtctaccagagggccgccgacatgatcaagggcaagacccac
gacgagatccgcgccaccttcagcatcgccaacgacttcacccaggaggaggaggacgag
ttgcgcgagcagtacgcctggatcttcgaccgcgagtag

DBGET integrated database retrieval system