Panicum virgatum (switchgrass): 120696236
Help
Entry
120696236 CDS
T07260
Name
(RefSeq) ribonuclease 1-like
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120696236
Enzymes [BR:
pvir01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
120696236
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
120696236
Prokaryotic type
120696236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
120696236
NCBI-ProteinID:
XP_039835299
LinkDB
All DBs
Position
2K:64885655..64886740
Genome browser
AA seq
244 aa
AA seq
DB search
MMKLAVACGLVLLSSLLAVSSTAEQFDFFYFVQQWPGSFCDTWRGCCFPDTGKPAADFGI
HGLWPNYATCHGRDDDAFSIVGRRGKCWPEYCEEEDGNALSPWEIRDLVASLSRSWPTLS
CRGGDSFEFWSYEWKKHGTCSNLRPHDYFARALELKAAHNLTAILAGAGIVPSDTETYPM
SGVGDAIAAATGATANLQCNRDKDGQTQLYQVFQCVDREAKNLIDCPLHMRSRCSGDRVK
LPLF
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctcgcggtcgcctgcggcctcgtcctgctttcttctctcctcgccgtctcg
tcgacggcggagcaatttgatttcttctactttgtgcagcagtggccggggtccttctgc
gacacgtggagggggtgctgcttcccggacaccggcaagccggcggcggacttcggcatc
cacgggctgtggcccaactacgccacgtgccatggccgcgacgacgacgccttctccatc
gtggggcggcggggcaagtgctggcccgagtactgcgaggaggaggacggcaacgcgctg
agcccgtgggagatccgggacctggtggcgtccctgtcccggagctggccgacgctgtcg
tgcaggggcggggacagcttcgagttctggagctacgagtggaagaagcacggcacctgc
tccaacctccggccgcacgactacttcgcgcgcgcgctcgagctcaaggcggcgcacaac
ctcaccgccatcctcgccggcgccggcatcgtgccgtcggacactgagacgtaccccatg
agcggcgtcggcgacgccatcgccgcggcgaccggggccacggcgaacctgcagtgcaac
cgcgacaaggacggccagacgcagctgtaccaggtgttccagtgcgtcgaccgggaggcg
aagaacctcatcgactgtccgctgcacatgcgcagccggtgctccggcgacagggtcaag
ctgcccctcttctga
DBGET
integrated database retrieval system
