Panicum virgatum (switchgrass): 120696237
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Entry
120696237 CDS
T07260
Name
(RefSeq) ribonuclease 1-like
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120696237
Enzymes [BR:
pvir01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
120696237
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
120696237
Prokaryotic type
120696237
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GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
120696237
NCBI-ProteinID:
XP_039835300
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All DBs
Position
2K:64902106..64903171
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AA seq
253 aa
AA seq
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METSIAFVLLFSLLAVSSVAEKFDFFYLVQQWPGSFCDTRQGCCFPDTGKPAAEFGIHGL
WPNYAKCGRGRGEELASAVLGEDDIAFFSGAVGRRGKCWPEFCDDGNALSLWEVRDLVAS
LNRNWPTLSCKSGRSFEFWSYEWKKHGTCSNLAQHDYFARALAIKAAYNLTAILAGAGIV
PSDTATYSLSSVRDAIAQGTGFTANLECNRDADGNAQLFQVCQCVDRQGKKLIDCPLSMP
TKCSSDQLKLPLF
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcgatcgccttcgtgctgctgttctctctcctcgccgtctcgtccgtggcg
gagaagttcgatttcttctaccttgttcaacagtggccggggtcgttctgcgacacgcgg
cagggctgctgcttcccggacacgggcaagccggcggcggagttcggcatccacgggctg
tggcccaactacgccaagtgcggccgcggccgcggggaggagctcgccagcgccgtgctc
ggcgaggacgacatcgccttcttctccggggccgtggggcggcggggcaagtgctggccc
gagttctgcgacgacggcaacgcgctgagcctgtgggaggtccgggacctggtggcgtcc
ctgaaccggaactggccgacgctgtcgtgcaagagcgggcgcagcttcgagttctggagc
tacgagtggaagaagcacggcacctgctccaacctcgcgcagcacgactacttcgcgcgc
gcgctcgcgatcaaggcggcgtacaacctcaccgcgatcctcgccggcgccgggatcgtg
ccgtcggacacggcgacctactcgctgagcagcgtgagggacgccatcgcgcaggggacc
gggttcacggccaacctcgagtgcaaccgcgacgccgacggcaacgcgcagctgttccag
gtgtgccagtgcgtggaccggcaggggaagaagctcatcgactgcccgctgtccatgccc
accaagtgctccagcgaccagctcaagctgccgctcttctga
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