Panicum virgatum (switchgrass): 120696271
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Entry
120696271 CDS
T07260
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 21
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00040
Pentose and glucuronate interconversions
pvir01100
Metabolic pathways
Module
pvir_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120696271
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
120696271
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Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120696271
NCBI-ProteinID:
XP_039835324
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Position
2K:68286756..68288725
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AA seq
568 aa
AA seq
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MSKGAIIGASTVLVVAVVAAVCVVSFKGNSSKGEGEGDGNLSMSVKSVKAFCQPTDYQQT
CEAELSKAAGNATSPTDLAKAIFAVTSDKIHKAISESATLNELKNDKRTSGALQNCKELL
EYAIDDLKATFDKLGGFEMTNFKKAIDDLKTWLSAALTYQDTCLDGFANATTTEASAKMQ
NALNASQELTEDILAVVDQFSDTLGGLSVGRRLLGEDGMPSWMPAEGGSRRLLEEASPSS
PDFKPNVTVAADGSGDVNTIKEALDRVPPKNAAMYVVYVKAGTYKEYVSVGRPQTNVAFI
GDGADKTIITGNKNFKMNLTTKDTATMEAIGNGFFMKGVRVENTAGAENHQAVALRVQSD
QAVFYQCTFDGYQDTLYTHAQRQFFRDCTVTGTIDFIFGNSQVVIQNCLIQPRKPMANQA
NIITAQGRRDKRSVGGTVLHNCTIEPHPDFKAEAGGKIATYLARPWKEYSRTLYIQNDIG
GFIDPKGWLEWNGDFGLETLFYAEVDNRGAGADMSKRAKWGGIKTVTYAEAQKEYTVEVF
IQGQHFIPKFGVPYIPGLLPQAQQGRTH
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaggtgctatcatcggcgcgtcgaccgtccttgtggtggccgttgtcgccgcc
gtgtgcgtggtgtccttcaagggcaactccagcaagggcgagggcgagggcgatggcaat
ctctccatgtccgtcaagtccgtcaaggccttctgccagcccaccgactaccagcagacc
tgcgaggcggagctgagcaaggccgccggcaacgccacctcccccaccgacctcgccaag
gccatcttcgccgtcacctccgacaagatccacaaggccatcagcgagtcggccaccctc
aacgagctcaagaacgacaagcgcacctcgggcgcgctccagaactgcaaggagctgctc
gagtacgccatcgacgacctcaaggccaccttcgacaagctcggcggcttcgagatgacc
aacttcaagaaggccatcgacgacctcaagacctggctctccgccgcgctcacctaccag
gacacctgcctcgacggcttcgccaacgccaccacaaccgaggcatcggccaagatgcag
aacgcgctcaacgcgtcgcaggagctcaccgaggacatcctggccgtggtggaccagttc
tccgacacgctggggggcctcagcgtggggaggcggctgctgggcgaggacggcatgcct
tcctggatgccggccgagggcggcagcaggcggctcctggaggaggcgtcgccgtcgtcc
cccgatttcaagcccaacgtgacggtggcggcggacggcagcggcgacgtcaataccatc
aaggaggcgctggacagggtgccgcccaagaacgcggccatgtacgtggtgtacgtcaag
gccgggacgtacaaggagtacgtctccgtggggcggccccagacgaacgtggccttcatc
ggcgacggcgccgacaagaccatcatcacggggaacaagaacttcaagatgaacctgacg
accaaggacacggccaccatggaggccatcgggaacggcttcttcatgaagggggtgcgg
gtggagaacacggcgggggcggagaaccaccaggcggtggcgctgcgggtgcagagcgac
caggcggtgttctaccagtgcaccttcgacgggtaccaggacacgctgtacacgcacgcg
cagcggcagttcttcagggactgcacggtcacggggaccatcgacttcatattcggaaac
tcgcaggtggtgatccagaactgcctcatccagccccgcaagcctatggcgaaccaggcc
aacatcatcaccgcgcaggggcggcgcgacaagcgctcggtgggcggcaccgtgctgcac
aactgcaccatcgagccgcacccggacttcaaggcggaggccggcggcaagatcgcgacg
tacctggcgcggccctggaaggagtactcgcgcacgctctacatccagaacgacatcggc
ggcttcatcgaccccaagggctggctcgagtggaacggcgacttcggcctcgagacgctc
ttctacgcggaggtggacaaccgcggcgccggcgccgacatgagcaagcgcgccaagtgg
ggcggcatcaagaccgtcacctacgccgaggcgcagaaggagtacaccgtcgaggtcttc
atccagggccagcacttcataccaaagttcggagtgccatacataccgggattgctgccg
caggcgcagcaaggaaggacgcactga
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