Panicum virgatum (switchgrass): 120696502
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Entry
120696502 CDS
T07260
Name
(RefSeq) ubiquitin-activating enzyme E1 2
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120696502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120696502
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120696502
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
120696502
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
120696502
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120696502
Exosomal proteins of other body fluids (saliva and urine)
120696502
Exosomal proteins of colorectal cancer cells
120696502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_UFD
E1_4HB
Motif
Other DBs
NCBI-GeneID:
120696502
NCBI-ProteinID:
XP_039835368
LinkDB
All DBs
Position
3K:complement(235713..241911)
Genome browser
AA seq
1048 aa
AA seq
DB search
MLPRKRGVDAGEVQDLHNKAPRPAAPAPAQDDPMAARAPEIDEDLHSRQLAVYGRETMKR
LFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGKVDLWDLSSNFFLSEKDVGQNRAQ
ACVPKLQELNNAVIISTITGDLTKEQLSNFQAVVFTDISIEKAVEFDDYCHSHQPPIAFI
KSEVRGLFGSVFCDFGPEFTVLDVDGEEPHTGIVASISNDNPALVSCVDDERLEFQDGDL
VIFSEVHGMTELNDGKPRKIKSARPYSFTLEEDTTSYGTYIRGGIVTQVKPPKVLKFKTL
KEAIKEPGEFLMSDFSKFDRPPLLHLAFQALDKFRTELLRFPIAGSADDAQKLIDFAISI
NESLGESKVEETDKKLLQHFASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYF
DSVESLPVEPLEASDLKPENSRYDAQISVFGAKLQKKLEQSKIFMVGSGALGCEFLKNLA
LMGISCSENGKLTVTDDDVIEKSNLSRQFLFRDWNIGQPKSTVAATAAMAINPKLHVEAL
QNRASPETENVFNDAFWESLDAVVNALDNVTARMYIDSRCVYFQKPLLESGTLGAKCNTQ
MVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPTEVNAFLS
NPSGYATAARTAGDAQARDQLERVIECLDRDKCETFQDCITWARLKFEDYFANRVKQLTF
TFPEDAMTSSGAPFWSAPKRFPRPLEFSSADPSHLNFLLAASILRAETFGIPIPDWAKNP
KKLAEAVDKVIVPDFQPKQGVKIETDEKATSLSSASVDDAAVIEELIAKLEAISKTLPPG
FHMNPIQFEKDDDTNFHMDLIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMA
TGLVCLELYKVLAGGHKVEDYRNTFANLAIPLFSMAEPVPPKTIKHQDMSWTVWDRWTIT
GNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKVRLDKKVVDVAREVAKVEVPSY
RRHLDVVVACEDDDDNDVDIPLVSIYFR
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcttccccggaagcggggggtcgacgccggcgaggtccaggacttgcacaacaaggcc
ccccgacccgccgcccccgcacccgcccaggacgaccccatggccgccagggcgcccgag
atcgatgaggacctccacagccgccagctcgccgtctacggacgcgagaccatgaagcga
ctcttcggctccaacgtcctcgtctctggactacagggactcggcgctgagattgcaaag
aaccttgtccttgcgggtgtcaagtccgtaaccttgcatgatgatggcaaagttgaccta
tgggacttatcaagcaacttcttcctctccgagaaggatgttggtcaaaaccgtgctcaa
gcatgtgttccaaagcttcaagagcttaacaatgctgttatcatctctaccataactggt
gatttgaccaaggagcagctttctaactttcaggctgtggtttttactgatatcagcata
gaaaaagcagttgagtttgatgattactgtcatagccatcagccaccaattgctttcatt
aagtcggaagttcgtggtcttttcggcagtgttttctgtgactttggtcctgagtttact
gttttggatgttgatggtgaggagccgcatacaggaattgtggcatcaatcagcaatgac
aacccagcacttgtttcttgtgtggatgatgagcgtctggagttccaggatggcgatcta
gttattttctctgaagtgcatggaatgactgagctcaatgatggaaaaccaagaaagatt
aagagtgctaggccttattcttttactctagaagaagacaccacctcatatggcacttac
attagaggtggtattgtcacacaagtgaagccacccaaggttcttaagttcaaaaccttg
aaggaggcaatcaaggagccaggagaatttctcatgagtgatttctccaagtttgaccgc
ccacctcttttgcatttggccttccaagctctggacaagtttaggactgagttgctgcga
ttcccaattgctggttcagctgacgatgcacaaaagcttatagattttgctattagtatt
aatgaaagtcttggtgaaagtaaggttgaagaaactgataaaaagctcctgcagcatttc
gcaagtggttccagggctgttttgaatcctatggctgcaatgtttggtggtattgtaggt
caggaagttgttaaagcatgctcagggaaattccacccactttaccagttcttctacttc
gattctgttgaatcactgccagttgaaccgttggaggccagtgatttgaagccggagaac
agtagatacgatgcacaaattagtgtatttggggctaagcttcaaaagaaactggagcag
tcaaaaatattcatggttggttctggggctcttggatgtgaatttttgaagaaccttgca
ttaatgggcatttcttgcagtgagaatgggaagctgactgtgacagatgatgatgttata
gaaaagagcaatctcagtcgccagttcctcttccgtgactggaacattgggcagcccaag
tccacagttgctgctactgctgctatggcaattaatcctaagcttcatgttgaggccctt
cagaacagggcaagtcctgagactgaaaatgtgtttaatgatgccttttgggagagcttg
gatgctgttgtcaatgccttggacaatgtgactgcaagaatgtacattgactccaggtgt
gtgtatttccagaagccacttcttgaatctgggactctgggtgctaagtgcaacacgcag
atggtcattcctcacctaacagaaaactatggggcatccagagatccacctgaaaagcag
gcgcctatgtgcactgtacattcatttcctcataatattgatcactgcctaacgtgggca
aggtctgagtttgagggtctactagagaagactcccactgaagtaaacgcgttcctgtca
aatcctagtggatatgccactgctgcgagaactgctggtgatgcacaggctagggatcaa
cttgagcgagttattgaatgccttgacagagacaagtgtgagacattccaagattgtatt
acctgggctcggcttaagtttgaggactatttcgccaaccgtgtgaagcagctgacgttt
accttccctgaagacgcaatgacaagctctggtgctcctttctggtctgctcctaagcgg
ttcccgcgacctctggagttctcatctgctgacccaagccacctcaactttctgttggct
gcctcgatattaagggcggagacatttggaatacccatacctgattgggccaaaaaccca
aagaaactggctgaagctgttgacaaggtcatcgtacctgatttccaaccaaaacagggg
gttaaaatagagacagatgaaaaggctactagcctatcctctgcatctgttgatgatgct
gccgtcattgaagagcttattgcaaagttggaagcaatttccaaaacattgccaccagga
ttccacatgaacccaatacagtttgagaaggatgatgacaccaatttccatatggacttg
atagctggctttgctaacatgcgggcacggaactacagcatccctgaagttgacaagctg
aaggcaaagttcatagctggaaggatcatcccagccatcgccacctcgaccgcaatggcc
accggccttgtctgcctggagctttacaaagtcctcgctgggggtcacaaggttgaagac
taccggaacacatttgcaaacctcgcaatccccctcttctccatggcggagcctgtgcca
cccaagaccatcaagcaccaggacatgtcctggaccgtgtgggaccgctggaccataact
ggcaacatcacgctaagggagctcctagagtggctcaaggagaagggtttgaatgcttac
agcatatcctgtggcacctcactgctgtacaactccatgttccccaggcacaaggtgcgg
ctggacaagaaggtcgtggatgtggcaagggaggtggccaaggtggaggtgccctcttat
cgccgccatctggatgtcgtggtggcctgtgaggatgacgatgacaatgatgtggacatt
cctcttgtgtccatttacttccgttga
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