Panicum virgatum (switchgrass): 120696521
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Entry
120696521 CDS
T07260
Name
(RefSeq) RNA-directed DNA methylation 4-like isoform X1
KO
K28237
RNA polymerase II nuclear localization protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120696521
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120696521
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1499
Motif
Other DBs
NCBI-GeneID:
120696521
NCBI-ProteinID:
XP_039835388
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Position
3K:complement(399314..403012)
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AA seq
336 aa
AA seq
DB search
MAAAAAPAGEASTSEPAAAREKPIVVRVKRKPSQTRPDAFWLDINERPSKKAMLDFSSLS
ISEPSSSSSSAKASEEQPRVKKLLVQHIETVHHSRAVEDVLHSLLLADSDTKEIKSKTKE
WNDRIKQDKKPDQLRSAARQRHEDLGRNARFAQIWKSRKGEKDEADESLREICHLYDAVQ
VDPDEEKNPAEPRPSRITSFEEGAVLCNFLPLIREYLPSAAVEIESDIISLAQSEDSEVY
DIYTVKEVDDTNMEDMSAASYPRLQVDDDEDECYDDDYPYETDDSNAEDNPLFDYPEELS
EDEDDGSNDEDPFEDMEGSGSEYEKEEVEVEADKQW
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcggcggcgcccgccggcgaagcctccacctcggagcctgcggcggcgagg
gagaagcccatcgtcgtccgggtcaagcgcaagccctcgcaaacccgcccggacgctttc
tggctagatattaatgaaaggccatccaagaaggcgatgctcgatttctccagcctctcc
atctccgaaccatcctcttcctcatccagtgctaaagcttcagaggaacaaccacgggtt
aagaagcttcttgttcaacacatagagacagtgcatcattctcgagccgttgaagatgtt
ttgcactctcttttgcttgctgactcagataccaaagagataaagagcaagacgaaggag
tggaatgacagaatcaagcaagacaaaaaaccagaccagctgcggtcagcagccaggcaa
aggcatgaggatttgggaagaaatgcccgctttgcacaaatatggaagagtcggaaagga
gaaaaggatgaagctgatgaatcactgagagaaatatgccatctttatgatgctgtccaa
gtagatccggatgaagagaagaatccagcagaaccacgtcccagcaggatcacttctttc
gaagagggtgctgttctatgcaactttcttccacttatacgggagtacttgccatcagct
gctgtggaaatcgagtcagatattatttcattggcgcaatcagaagattcagaagtttat
gacatctatactgtcaaggaggtggatgatacaaacatggaggatatgtcagcagcttca
tatccacggttacaagtggatgatgacgaagatgaatgctatgatgatgactacccctat
gaaacagatgattcaaatgcggaagacaatccactttttgattatcctgaagaattgtca
gaggatgaggatgatggtagcaacgatgaggatccttttgaagacatggaaggttctggc
tctgagtacgaaaaggaagaagtagaggtggaagccgacaagcaatggtga
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