Panicum virgatum (switchgrass): 120696576
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Entry
120696576 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 7 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120696576
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120696576
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120696576
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120696576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120696576
NCBI-ProteinID:
XP_039835468
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Position
3K:complement(897322..902654)
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AA seq
648 aa
AA seq
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MKGHQQHSSPLLLPPNKRRCTALAAAVPALVVCSILLPLVFLLGLHRPGYGSEEHAAVVI
STKLAGVGARNKQHLENGGAMKHKLLKDVSKKKTSGSNGILIEKSTRSKSKAKLKGAFSL
VELNNDTFESIGPHMLKRYQRKDLSGRSKESDTVLQQDTVVNGKQNGGQETVHEGNPKSC
EHEYGSYCLWSTEHREVMKDAIVKRLKDQLFIARAHYPSIAKIKQRERFTRELKQSIQEH
ERMLSDTITDADLPTVFAKKLEKMEHTIERAKSCEVGCSNVERKLRQLLDITEDEAYFHT
RQSAILYHLGVQTMPKTHHCLNMRLTLEYFKSRSIRTDQQNRQKLESPAFQHYVIFSRNV
LAVSTTINSTVLNCQDSGSIVFHLFTDAQNFYAMKHWFERNSYSEATVHVTNIEDHLKLP
KHAEMQQLLPSEEFRVTIRNYSEPSLRQMKTEYISVFGHSHFLLPDLLPGLNRVVVLDDD
LIVQKDLSSLWNLNMDGKVIGAVQFCGVKLGQLRSYISEHSFNSDACVWLSGLNVIELEK
WRDLHVTSLYDQSLQKLQKESLPSKRLKTLPVSMLAFQDLIYPLEDSWVLSGLGHDYGIS
KDHIEKAATLHYNGVMKPWLDLGIHNYKSYWRKYMTTGEMFMRECNIH
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcaccagcagcattcctctcccctgttgctgccgcccaataagcgccgctgc
accgccctcgccgccgccgtgccggcgctcgtcgtctgctccatcctgctcccgctcgtc
ttcctcctcggcctccatcgccctggctatggatcggaggagcacgccgcggtcgtcatc
agcaccaagttggccggtgtcggggcgcgtaacaagcagcatctggagaatgggggcgcc
atgaagcacaagctgctcaaggatgtttccaaaaagaagacatctggatctaacgggatc
ctgattgagaaatctactagatccaaatcaaaagcaaagctcaaaggtgctttctcttta
gttgagctaaataatgacaccttcgaaagtataggacctcatatgctgaaaagatatcaa
aggaaggacctgtccgggagatcaaaggaatctgacaccgttttgcaacaggatactgtt
gttaacggcaaacagaacggtggtcaagagacagtgcatgaggggaatcccaagtcctgt
gaacatgaatatggaagttactgcctctggtctactgagcatagggaagttatgaaagat
gctattgtgaagaggcttaaggatcaactttttattgcaagagctcattatcctagtatt
gcaaaaataaagcagcgcgaaagatttacccgtgaactgaagcaaagcattcaagaacat
gaacgcatgctaagtgacaccatcacagatgctgatctgccaacagtttttgcaaagaag
ctagagaaaatggagcacacgattgagagagccaagtcttgtgaagtaggatgttctaat
gttgaacggaaacttaggcagctacttgatataactgaagatgaagcttatttccataca
agacagagtgcaattctatatcatcttggtgtccagactatgccaaaaactcatcattgc
ttgaacatgagattaacattagaatatttcaaatctagatcaattcgcactgaccaacaa
aataggcagaagcttgaaagtcctgccttccagcactacgtaatattttccagaaacgta
cttgcagtttcaaccactattaattcaacagttttaaattgccaggattctggcagcatt
gttttccatttgttcactgatgcgcaaaatttttatgcgatgaagcattggtttgagaga
aattcatactcggaggctactgttcatgtaactaacattgaggatcatctgaaactccca
aagcatgcagagatgcaacaattattgccttcagaggaattccgtgtcacaattcgtaat
tattctgaaccttccctgaggcagatgaaaactgagtacatatctgtttttggccattca
catttcctgttgcctgaccttcttcctggtttgaatagagtagttgttctggatgatgat
ttgattgtccagaaagatttgtcatctctgtggaacctcaatatggatggcaaagtgatt
ggtgctgtccagttctgtggagttaaattaggacagctaagatcttatatttctgaacat
agtttcaactccgatgcatgtgtgtggttgtctggtctgaatgtcattgaattggaaaaa
tggagggacctccatgtcaccagtttgtatgatcaatcactccaaaagttgcaaaaggag
agcctgccatcaaagagactgaaaacactccctgttagtatgcttgcatttcaagatctg
atataccctttggaggactcatgggttctgtcaggccttggacatgattatggaattagt
aaagaccatatagaaaaggctgctacgctacactacaatggtgtcatgaaaccttggctt
gatttggggatacacaattacaaaagctactggaggaagtacatgactacaggagagatg
ttcatgagggaatgcaacattcactaa
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