Panicum virgatum (switchgrass): 120696606
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Entry
120696606 CDS
T07260
Name
(RefSeq) formin-2-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120696606
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120696606
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
ALIX_LYPXL_bnd
HH_RND_rel
Motif
Other DBs
NCBI-GeneID:
120696606
NCBI-ProteinID:
XP_039835494
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Position
3K:complement(1152851..1165065)
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AA seq
579 aa
AA seq
DB search
MAGAKADADAGGGVGGSFSEQRLVEKLNKLNSSAASIQTLSQWCIFHRKRAKRVVDTWEK
QFNSATKDKKVSFLYLSNDILQNSKRKGGDFVNEFWRVLPRSLKHFYENGGEDGKKVVAR
LIGIWDERKVFGTRIESLKDGILGDNPHILDNNGNSSNPSSNPPSNSKVSRKDSGTTVKK
LTVGGMPEKIVTAYQSVLDQHFDEDTALNKCKSTVGVLERINKDINDASTNGNQPASTLI
SDLQEQEMTLKQCIKQLESVDAARISLINQLKEALSEQESKSVVLRSQLQVARAEAEHVI
QLRQQLGGALATSATQSSPSPLMITPPEKTAGMVQGSGVRLTPPQSQPPTPATSLPPTVS
AVGDESKRSAAAMADKLASLSAPVLSSILSSLAAEQAASINGGPPSGEFSGGPPGFQIEK
RPRLEKQAGDMGALPFFGQAPQVQQQIGAVPTTLGGTQPPTPVSFPPPPPPLPSLLPPLL
QQFGQNTGGMIGMGGPFGMMASSMPPPPPLSNIMPAGFPGPSGPPPPPPLPPAQSQPQQQ
QQSPQAPQQSPTSTGFFQSSGMSFFPPVQVQQSPSAQRQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgaaggcggatgcagacgcgggcggcggggtaggaggctcctttagcgag
cagaggctggtcgagaagctcaacaagctcaacagctcagcggcgagtattcagacactt
tcacaatggtgcatttttcaccgcaagagggccaaaagggttgtagacacatgggaaaag
cagtttaatagtgcaacgaaggataagaaagtatcattcctgtatctatcgaatgatatc
ctgcaaaacagcaaacgcaagggaggagactttgtgaatgagttctggagggttctacct
agatcactgaaacatttctatgaaaatgggggagaagatggaaagaaagtagtggcaaga
ttaataggaatttgggatgaacgcaaggtttttgggacccgtattgaaagtctgaaagat
ggcattcttggtgacaaccctcatatattggataacaacgggaatagttcaaatcctagc
tctaatcccccttcaaattccaaagtttcacggaaggattctggtacaacagtaaaaaaa
cttactgttggtgggatgcctgaaaagattgtgactgcataccaatcggtccttgatcaa
cattttgatgaagacacagctttaaacaaatgtaagagtactgttggtgttttggagagg
ataaataaagatataaacgatgctagcaccaatggtaatcagccagcatcaacattgatt
tctgaccttcaagaacaagaaatgaccctaaagcagtgcatcaaacaacttgaaagtgta
gatgcggcgaggatatccctgatcaatcaattaaaagaagctctcagcgaacaggagtca
aagtcagtggttcttcgcagtcagttgcaagttgctcgagcagaggctgaacatgtcatt
caacttagacaacaactgggtggtgcccttgccacaagtgccacacaatctagtcctagt
ccgctcatgattactccaccagagaaaacagctggtatggtgcaaggttccggagtaagg
ttgacacctccacagtcacagccaccgactccagcaacctcacttccccctacggtcagt
gcagtgggtgacgagtccaagaggtcggcagcagctatggcagataagcttgcatctttg
tcagcacctgtgctgagctccattctctcatctcttgccgctgagcaagctgcttccata
aatggcggaccaccgtctggagaattctctggaggaccaccaggcttccagattgaaaag
aggcctaggcttgagaagcaggccggtgatatgggtgctcttcccttttttgggcaagca
ccacaggtgcaacaacagattggagcagtgcctactactcttggaggcacgcaaccacca
acgccagtttcatttccaccacctccaccgccattgccatctctattgccaccgcttcta
caacaatttggtcaaaatactggaggaatgatcggaatgggaggacctttcgggatgatg
gcaagctctatgccacctccacctcctttgtccaacattatgccggcaggtttcccagga
ccaagtgggccacctcctccacctccacttccacccgctcagagccagccccagcagcag
cagcaatctcctcaggcaccacagcagtcaccgacatcaactggattctttcaatcatca
ggcatgagcttctttcctccagtgcaggtgcagcaatctccatctgcccaacgacagtga
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