Panicum virgatum (switchgrass): 120696615
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Entry
120696615 CDS
T07260
Name
(RefSeq) alpha-L-arabinofuranosidase 1-like isoform X1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120696615
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
120696615
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Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
120696615
NCBI-ProteinID:
XP_039835507
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Position
3K:1220624..1227630
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AA seq
658 aa
AA seq
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MPMDFKEASSTTIFCLLLLFCLGCRCLASELVATQAATLKVDASPQSARKIPETLFGIFF
EEINHAGAGGIWAELVSNRGFEAGGPHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVA
LRMVVLCDDCPTGGVGIYNPGFWGMNIGDGKAYNLVMYVKSPETTDLTVSLTSSDGLQNL
ASTTITVYGTSNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWFDQVSLMPEDTYKGHGFR
TELISMLLDLKPRFLRFPGGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGL
GYYEFLQLAEDLGAAPIWVFNNGVSHNDEVDTAAIAPFVKDVLDSLEFARGSADSTWGSV
RAAMGHPEPFPVKYVAIGNEDCGKKFYRGNYLKFYNAIRQAYPDIQMISNCDGSSRPLDH
PADLYDFHVYTDSKTLFNMKSTFDSTSRSGPKAFVSEYAVWRSDAGRGSLLASLAEAAFL
TGLEKNSDIVQMASYAPLFVNDNDRTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIH
PITVSSNYSGSLAASAITWQDSENSFLRVKVVNFGSDAISLTISTSGLQASVNALGSTTT
VLTSGNVMDENSFSNPNKVVPVKSELSNAAEQMQVTLAPHSVSAFDLALAQSKLIAEM
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcctatggatttcaaggaagcgtcatctactacaatcttctgcctcttgctcctattc
tgcctgggctgcagatgcctggcatcagaactagtggccacacaggcagcaactctcaag
gttgacgcctcaccgcagtcagcccgaaagatccctgaaacactatttgggatatttttt
gaggagatcaatcatgcaggagctggtggaatttgggcagagcttgttagtaaccgaggt
ttcgaagctggaggcccacatactccctcaaacattgacccatggtccattattggagat
gactcttccgtatttgtggcgactgatcgtacatcatgtttcagtcgaaacattgttgct
ctgaggatggtggtcctctgtgatgactgtcctactggtggtgttggtatttacaacccg
gggttctggggcatgaacataggagatggaaaagcgtacaatcttgttatgtacgttaag
tcaccagaaacaacagacttgactgtttcactaacaagctctgatgggttgcaaaacctg
gcttcaactactataacagtttatggtacatcaaattggacaaaagtggagcagaagttg
gttgctaaaggaaccaatagaacctcaaggcttcaaataacaactaacaaaaaaggagtt
gtttggtttgatcaagtctcactcatgcctgaagacacatacaagggacatggttttcgc
acagaacttatatccatgcttttggatttgaaaccgcgattcttgagatttcctggaggc
tgctttgtagaaggcgattggttaagaaatgcattcaggtggagagaatctattggtcca
tgggaagagaggcctggacactttggggatgtttggcattactggactgatgacggcctc
ggatattatgaatttctccagcttgcggaggacctgggtgctgccccaatctgggtattc
aacaatggagttagccacaatgatgaagttgatactgctgctattgctccgtttgtaaag
gatgtattggacagtctagaatttgcaagggggagtgcggattcaacatggggttctgtt
agggctgcgatggggcaccctgaaccattcccagtgaaatatgttgcaattggaaatgaa
gattgtggaaaaaaattttaccgcggtaattacctcaagttctacaatgctataaggcag
gcctatccagatattcaaatgatttcaaactgtgatggctcgtctagaccacttgatcat
cctgctgatttatacgacttccatgtatataccgattctaaaactttgtttaacatgaag
agcacattcgacagcacatctcgtagtggaccaaaggcctttgtgagtgagtacgccgtt
tggagaagtgatgcaggtagaggaagtcttcttgcttcattggcggaagctgctttcctt
actggtctggagaagaacagtgacattgttcagatggcaagttatgctccactatttgta
aatgacaatgacagaacgtggaacccagatgctatcgtcttcaactcgtggcaacattat
ggaactcctagttactggatgcagacacttttccgtgagtccagcggtgctatgattcat
ccaattacagtcagttccaactactctggttcgctagcagcatctgcaattacttggcag
gattcagagaacagcttcctaagagtaaaggttgtaaactttggatcagatgctattagc
cttacaatctccacaagtggacttcaggccagtgttaatgctctgggatcaaccaccact
gttctcacatccgggaatgtgatggatgaaaattctttcagtaacccaaacaaggttgtg
ccggtgaagagcgagctgagcaatgccgcggagcagatgcaggtcacgctggctcctcac
tccgtcagtgcgttcgatctcgcgctggctcagtccaaacttattgcggagatgtga
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