Panicum virgatum (switchgrass): 120696628
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Entry
120696628 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 25-like
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120696628
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120696628
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120696628
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120696628
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120696628
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_1
EF-hand_7
EF-hand_6
PK_Tyr_Ser-Thr
EF-hand_5
EF-hand_8
EH
EF-hand_9
DUF5580_M
AIF-1
EFhand_Ca_insen
EF_EFCAB10_C
Kinase-like
SPARC_Ca_bdg
Kdo
SPEF2_C
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-GeneID:
120696628
NCBI-ProteinID:
XP_039835529
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All DBs
Position
3K:1399353..1401829
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AA seq
535 aa
AA seq
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MGQCCAKGAGKGADDADADGPKAEVDHGAAEAAAPGTTTKPGTSSPSGTGGRASTSSKPA
APMGGVLGRPMEDVRATYSMGKELGRGQFGVTHLCTHRATGEKLACKSIAKRKLVAKEDI
DDVRREVQIMHHLCGQPNVVGLRGAYEDKHNVHLVMELCAGGELFDRIIARGQYTERAAA
DLLRTIVQIVHSCHSMGVMHRDIKPENFLLLSKDEDAPLKATDFGLSVFFKEGEVLRDIV
GSAYYIAPEVLKRRYGPEADIWSVGVMLYIFLAGVPPFWAENESGIFTAILRGQLDLASE
PWPHISPGAKDLVRKMLNINPKDRLTAFQVLNHPWIKEDGDAPDTPLDNVVLNRLKQFRA
MNQFKKAALRIIAGCLSEEEITGLKEMFKNIDKDNSGTITLDELKNGLAKHGTKLSDGEI
QQLMEAADADGNGLIDYDEFVTATVHMNKLDREEHLYTAFQYFDKDNSGYITREELEQAL
KEQGLYDADKIKEVISDADSDNDGRIDYSEFVAMMRKGTAGAEPLNNKKRRDVVL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggccagtgctgcgccaagggcgccgggaagggcgccgacgacgccgacgcggacggc
cccaaggcggaggtggaccatggggcggcggaggcggcggcgcctggtacgacgacgaag
cctggcacgtcgtcgccgagcgggacaggcggcagggcgagcacgagcagcaagccggcg
gcgccgatgggcggggtgctggggcggccgatggaggacgtgcgcgcgacctactcgatg
ggcaaggagctggggcgggggcagttcggcgtgacgcacctgtgcacgcaccgcgcgacg
ggggagaagctggcgtgcaagagcatcgccaagcggaagctggtggccaaggaggacatc
gacgacgtgcggcgcgaggtccagatcatgcaccacctctgcgggcagcccaacgtggtc
ggcctcaggggcgcctacgaggacaagcacaacgtccacctcgtcatggagctctgcgcc
ggcggcgagctcttcgaccgcatcatcgccaggggccagtacacggagcgcgccgccgcc
gacctgctgcgcaccatcgtgcagatcgtgcacagctgccactccatgggggtcatgcac
cgggacatcaagcccgagaacttcctgctgctcagcaaggacgaggacgcgccgctcaag
gccaccgacttcggcctctccgtcttcttcaaggagggcgaggtgctccgcgacatcgtc
ggcagcgcctactacatcgcccccgaggtgctcaagaggaggtacggcccggaggccgac
atctggagcgtcggcgtcatgctctacatcttcctcgccggcgtgccccccttctgggcg
gagaacgagagcggcatcttcaccgccatcctccgcggccagctcgacctcgccagcgag
ccgtggccgcacatctcgccgggagccaaggatctcgtcaggaagatgctcaacatcaac
cccaaggaccgcctcacggcgttccaggtcctcaatcacccatggatcaaagaggatgga
gacgcacctgacacgccacttgacaacgttgttctcaacaggctcaagcagttcagggca
atgaaccagttcaagaaagcggcattgaggatcatagctgggtgcctatctgaagaggag
atcaccgggctcaaggagatgttcaagaacatcgacaaagataacagtgggaccatcacg
ctcgatgagctcaaaaacgggttggccaagcatggaaccaagctgtcagacggtgaaatt
cagcagctgatggaagcagctgatgctgacggcaacgggttaattgactacgacgagttc
gtcactgcaacagtgcacatgaacaaactggacagagaggagcacctttacacagcattc
cagtatttcgacaaggacaacagcgggtacattacaagagaggagcttgagcaagccttg
aaagagcaagggttgtacgatgccgataaaatcaaagaggtcatctcagatgccgactct
gacaatgatggaaggatagattattcagagtttgtggcaatgatgaggaaagggacagct
ggtgctgagccactgaacaacaagaagaggcgagacgtagtcctatag
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