Panicum virgatum (switchgrass): 120696632
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Entry
120696632 CDS
T07260
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120696632
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120696632
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
CAF1C_H4-bd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_DCAF4
MIOS_WD40
Beta-prop_RIG_1st
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
120696632
NCBI-ProteinID:
XP_039835533
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Position
3K:complement(1332021..1336029)
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AA seq
480 aa
AA seq
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MGRTIKKAKKAKSKKTKKVEASSSSNPAVAPGPAKVWQPGVDALEDGEELQFDPEAYNYL
RGFDIGWSCLSFDVVRDQLGLVRSEFPHTLYGVAGTQAEKASSNYIGIFKLSNIRGKKRE
PIPASTVDGDTDADSDSSSDEEDEEMNEDTKPILHLKKVAHAGCVNRIHSMTQKPHLCAT
WGDTGHVQVWDLSSYLNSLAEAESGAPAPKEDDIIHKHLPLKVFSGHKDEGYALDWSPLV
TGRLVSGDCNKCIHLWEPTSNNWNVDANPFVGHTASVEDLQWSPTEADVFASCSVDGTIA
IWDIRTGKKPCISIKAHKADVNVISWNRLASSMIASGCDDGSFSVRDLRSIQEDSLVAHF
EYHKKAITSIEWSPHEAASLAVTSEDHQLTIWDLSLERDAEEEAEFRAKMKEQANAPEDL
PPQLLFVHQGQKDLKELHWHPQIPSMIISTAVDGFNVLMPSNIDTTIPGNTDATMASAKS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaccatcaagaaggccaagaaggccaaatccaagaagaccaagaaagttgaa
gcttcctcgtcatctaatcctgcggttgcccctggtccggccaaggtctggcaaccgggt
gtagatgcactggaagatggggaggaactccagtttgatcctgaggcttacaattatctc
cgagggttcgacattggctggtcttgcttgagttttgatgttgtgcgtgatcaacttgga
ctcgtacgatcagagttcccccatacattatatggtgttgctggaacgcaggctgagaag
gcttcatcaaattatattggcattttcaagctttctaacataagggggaagaaacgggaa
cctataccagcttcaacagttgatggtgacactgatgcggatagtgacagcagcagtgat
gaagaggatgaagaaatgaatgaggatacaaagcccattctacatctaaaaaaagtggct
catgcgggttgtgtaaatcgaatacactcaatgactcaaaaaccacatctatgtgctacg
tggggagatactggtcatgttcaggtgtgggacttgagctcctaccttaattccttagca
gaagcagagtcaggggcacctgcacccaaagaagatgacataatccacaaacacttgcct
ctgaaagtatttagtggccataaagatgagggatatgcacttgattggagtccgcttgtt
actgggagacttgtttctggcgactgcaataagtgcattcacctgtgggagccaacttca
aacaactggaacgtagatgcaaatccatttgttggacacactgcaagcgttgaagatcta
cagtggagtcccacggaagctgacgtatttgcctcttgttctgtggatggtactatagcg
atatgggatatacgtacagggaagaaaccttgtatttctataaaagctcataaagccgat
gtgaatgttatctcatggaataggcttgctagctccatgatagcttcagggtgtgatgat
ggcagtttctcagttcgtgatctcagatcaattcaggaggactcattggtagcccatttt
gagtaccacaagaaagcaattacatctattgagtggagtccacatgaagcggcatcactg
gctgtaacgtctgaagatcatcaactcacaatttgggacctttcactggaaagagatgct
gaagaggaggctgagttcagagcgaagatgaaggagcaggcaaatgcacctgaagattta
cccccacaacttctctttgttcatcagggtcaaaaagacttgaaagaactgcattggcac
ccacagataccctcgatgatcatatctacagcagttgacggctttaatgtgttgatgccc
agcaacattgatacaaccattcctggcaacactgatgcaaccatggcatctgctaagtca
tag
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integrated database retrieval system
