Panicum virgatum (switchgrass): 120696643
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Entry
120696643 CDS
T07260
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00280
Valine, leucine and isoleucine degradation
pvir00650
Butanoate metabolism
pvir01100
Metabolic pathways
pvir04146
Peroxisome
Module
pvir_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120696643
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120696643
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120696643
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
120696643
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Motif
Pfam:
HMGL-like
TGT
Motif
Other DBs
NCBI-GeneID:
120696643
NCBI-ProteinID:
XP_039835545
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Position
3K:complement(1506410..1516411)
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AA seq
387 aa
AA seq
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MSSLEEPLGLGDLPKLSINRLGSFSQPSAYRRAAADDCNTRKYNSSCNGGALMGFHANSH
AWHQQCRQADSSCDAVELRDLPRKVMWDLPSFVKIVEVGPRDGLQNEKGNVPTSVKIQLI
HKLVAAGLSVVEATSFVSPKWVPQLADAKEVLKGIQQMPNVRYPVLTPNLRGFEAAVAAG
AKEIAVFASASESFSKSNINCTIEESLVRYRDVTAAAKKHGLLIRGYVSCVIGCPVEGAI
DPSKVAYVAKELYNMGCSEISLGDTIGVGTPGSVVAMLEAVMSFVPVDKIAVHFHDTYGQ
ALANILVSLQMGISIVDSSVSGLGGCPYAKGATGNVATEDVVYMLHGLGIETNVDLNKLM
EAGNYISKHLGRPLGSKTAAALRRLTT
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcctcgaggagccgcttggtcttggagacctgccaaagttgagtattaacaga
cttggaagcttctcccagccaagtgcttatcgcagggcagcggctgatgactgcaacact
cgcaagtacaacagctcctgcaatggtggcgcgctgatgggtttccatgccaattctcat
gcatggcatcagcaatgccgtcaggccgattcgtcatgtgatgcagtggagcttagagat
ctccctcggaaggttatgtgggatctaccaagctttgtgaagattgttgaagttggaccc
cgagacggcctgcaaaacgaaaagggcaatgtaccgacatctgtaaagatacaactgata
cacaaattagtggctgcaggtttatcagtagttgaagccacaagttttgtatccccaaaa
tgggtgccgcagctagctgatgcaaaggaagtcctcaaaggaatccagcagatgccaaat
gtgcggtatcctgtgttaactcctaacctaagaggatttgaggctgctgttgcagctggt
gcaaaggaaattgcggtttttgcatctgcctctgaatccttctctaagtcgaacatcaac
tgtaccatcgaggaaagccttgttcggtaccgtgatgttactgctgctgccaagaaacat
ggactccttatccgtgggtatgtttcgtgtgtgattggttgccctgttgaaggtgcaatc
gatccatcaaaggtggcatatgtagctaaggagctttataacatgggctgctcagagatt
tcacttggcgatactattggtgttggtacaccaggtagtgtagttgctatgcttgaagct
gtcatgtccttcgttccagtggacaagattgccgttcatttccatgatacatacggccag
gcccttgccaatatcctagtatcccttcaaatggggatcagcatagtagactcctcagtt
tcaggccttggaggctgcccatatgcaaagggcgccactggcaatgtcgccactgaggat
gtcgtgtacatgctccatggcctaggcatagagaccaacgtggacctcaacaagctcatg
gaggctggcaattacatctccaagcatctaggaaggccactgggctccaagactgctgcc
gctctgcgcaggctaaccacctga
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