Panicum virgatum (switchgrass): 120696667
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Entry
120696667 CDS
T07260
Name
(RefSeq) PP2A regulatory subunit TAP46
KO
K17606
immunoglobulin-binding protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120696667
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120696667
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120696667
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Other PP2-interacting proteins
120696667
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
Others
120696667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAP42
Motif
Other DBs
NCBI-GeneID:
120696667
NCBI-ProteinID:
XP_039835577
LinkDB
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Position
3K:1657651..1661460
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AA seq
415 aa
AA seq
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MVEVEEVGNKMQSQMRLHPEPEDDADLPLPALFDRASRLHGLASSSALDQEGIRKGVELL
RRCDEMVSKLGLFSTNETKEDVSTANLKYLLVPYYLGEMTEKIAQEDRIPILKASQNHLK
EFIALCEALELIPEDELELSRQKQPDTTANRRAQKIARFRRQKAAETKLQEIKERKERRG
RSLRAAALSAPAEAGEEDALEDDGEEEREAWLATISLALCKAFDLLDMLKKEEEMLLAVK
ERQEKDGNAFAREMLDERTQKAEAWHHNAANRAPYSKPADPITCATFAQDVLEGRASVSQ
AHEHKHQPLIFGPASLVGGGLTSERERMAAQVFQPGYRLPTMSIEEAGLREMKMMEKWQE
RTANMIKEANSAWHKDGTSSAQEDEDAEEAKARAWDDWKDDNPRGAGNKKLTPCG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggtggaggaggtcgggaacaagatgcagtcgcagatgcgcctccatccagag
ccggaggacgacgccgacctcccgctccccgccctcttcgacagggcgtcccggctccac
ggcctcgcctccagctccgccctcgaccaggaagggatccggaagggggtcgagctgctg
cggcgctgcgacgagatggtcagcaagctcggcctcttctccaccaacgagacaaaggaa
gacgtctccaccgccaacctcaaataccttctcgtcccatactacctaggggaaatgact
gagaagatcgcacaggaggacaggatcccgattcttaaggcatcacagaaccatttgaag
gagtttattgctctatgtgaagcactagagcttattccagaggatgagcttgaattatct
agacagaagcagcctgatactacggcaaacagaagagcacagaagattgcccgtttcaga
cgtcaaaaagctgcagaaacgaagctccaagagattaaagagagaaaagaaaggcgtggg
cgctcattgagggcagctgctttatctgctcctgctgaagctggggaggaagatgccttg
gaggatgatggggaggaagaaagagaggcttggttagctactatctcattggctctctgc
aaggcctttgatcttctggacatgctaaagaaggaagaagaaatgcttctagcagtaaag
gaaagacaggaaaaggatgggaatgcatttgctcgtgaaatgcttgacgagcgtacacaa
aaagctgaagcatggcaccataatgctgcaaaccgtgcaccatattccaaaccagctgat
ccaatcacttgcgcaacatttgctcaagacgtccttgaaggtagagcaagtgtttcacaa
gctcatgagcacaaacaccaacccctgatatttggacctgcaagtcttgttggtggagga
ctaaccagtgaaagggaaagaatggcagcacaagttttccagcctggttacaggctgcca
acaatgagcatagaagaagctggtttacgtgaaatgaaaatgatggagaaatggcaagaa
agaaccgcaaatatgatcaaagaagcaaactcggcatggcacaaggacggtactagctca
gcccaagaggatgaggatgcagaggaggcaaaagcaagagcttgggacgactggaaggat
gacaaccctcgtggtgctggcaacaagaagctcacgccctgcggctaa
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