Panicum virgatum (switchgrass): 120696816
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Entry
120696816 CDS
T07260
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00071
Fatty acid degradation
pvir01100
Metabolic pathways
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120696816
00071 Fatty acid degradation
120696816
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120696816
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120696816
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120696816
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120696816
Lipid biosynthesis proteins [BR:
pvir01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120696816
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120696816
Exosomal proteins of breast cancer cells
120696816
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120696816
NCBI-ProteinID:
XP_039835760
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Position
3K:3156741..3162132
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AA seq
698 aa
AA seq
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MNPYFVGFLFPVAVSLLLRKRRKAEMKRGVQVEVGGEPGYAVRNYRFEQPVETHWEGVST
LAELFEQSCKEYVYMPLLGTRKLISREIESAPGGRSFEKLHLGEYEWKCYAEAFKSVCNF
SSGLIRLGHQKNERAAIFAETKAEWQVALQACFRQNITVVTIYASLGAEALCHSLNEAEV
TTVICDQRELKKLIDISGQLDTVTRIVYINEKGIPDEVSLARNSTSWIIESFDEVVRLGT
EAPVEANMPLPSDVAVIMYTSGSTGLPKGVMMTHRNVLATLSAVMTIVPALGSKDIYLAY
LPLAHILELAAETLMAAVGASIGYGSPLTLTDTSNKIKKGTLGDASALKPTLMTAVPAIL
DRVRDGVRKKVDATGGVAKKLFDIGYNRRLAAINGSWLGAWGLEKLLWDTLVFGKVRAIL
GGKIRFVLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSEYDDTSVGRVGAPL
PCSYVKLIDWPEGGYLTTDSPMPRGEIVIGGPNVTKGYFKNEAKTNEVYKDDEKGMRWFY
SGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPYVENIMVHADPFHNFC
VALVVAAHNELESWASQQGIKYSDFSDLCQKEEAVKEVLGSLAKAGKQARLEKFEIPAKI
KLIPEPWTPESGLVTAALKLKREVIRKMYDNDLAQLYA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttattttgttggcttccttttccccgttgcggtctccctgctcctccgcaag
aggagaaaggctgaaatgaagaggggagtgcaagtcgaggttggtggagaacctggatat
gcagtccgtaactatcgatttgagcagcctgttgagacacactgggaaggggtgtccacc
cttgctgagcttttcgagcaatcttgcaaggagtatgtctacatgcccctccttggcacc
aggaagctcatttcgagggaaatcgaatcagcacctggtggaagatcatttgagaagctt
catctgggcgagtatgaatggaagtgttacgctgaggccttcaagagcgtttgtaacttt
tcatctggcctaattcgattaggccaccagaagaatgagcgtgctgccatttttgccgag
acaaaagctgaatggcaggttgctttgcaggcatgcttcagacaaaatattacagttgtc
accatctatgcctcattgggagcggaagcattgtgccactcactaaatgaggctgaggtc
actactgtaatttgtgatcagcgagaactaaaaaagttgattgatataagtgggcagctt
gacactgtcacacgtattgtatatatcaatgagaaaggcatcccggatgaagtttcttta
gctcgaaacagcactagctggataattgagtcatttgatgaagtggttaggttaggaact
gaagcacctgttgaagcaaacatgcctctcccatctgatgttgcagtgataatgtacaca
agtggtagcacaggattacccaagggagttatgatgacccatcgcaatgtcctggctaca
ctttcagcagttatgaccatagtgcctgcacttggtagtaaagatatatacttggcgtac
ctcccacttgcacacattcttgagttggcagctgagacactaatggctgctgtcggggcc
tccatcggatacggatcacctttgaccctgactgatacgtcgaacaaaataaaaaaggga
actctaggtgatgcttctgcactgaagccaacattgatgactgctgtacctgctatactt
gaccgtgttcgtgatggtgtgaggaaaaaggtggatgctacaggtggtgtagcaaagaaa
ttgtttgacattggctataaccgccggcttgcagcaatcaatggaagctggcttggtgcc
tggggattagagaaactcttgtgggatacgcttgttttcggaaaggttcgtgcaattttg
ggaggaaagattcggtttgttctctctggtggagcacctctatctggggatactcagaga
tttatcaatatatgccttggggctccaatagggcaagggtatggtctgactgaaacttgt
gctggaggtacattttctgagtatgatgatacatctgttggccgtgttggtgctccacta
ccttgttcgtatgttaagttgattgactggcctgaaggtggatacttaacaactgattca
ccaatgcctcggggagaaatagtcatagggggtcctaatgtaaccaaaggctatttcaag
aatgaagccaaaacaaatgaagtctacaaggatgatgaaaaaggtatgcggtggttctat
tctggtgacattggacgtttccatccagatggctgccttgaaatcattgaccgtaagaaa
gatattgtgaagcttcagcatggtgaatatgtatctctggggaaggtggaggctgctttg
attgtgagcccatatgtggagaacatcatggttcacgctgatcctttccacaacttctgc
gttgcacttgtggtagctgcacacaatgagctggagagctgggcttcgcagcaaggaatt
aaatatagcgatttctcagatttatgccagaaggaagaggctgttaaagaagtacttgga
tctttagcaaaggctggaaagcaagctcgacttgagaagtttgagatcccagccaaaatc
aagttgataccagagccatggacccccgagtcaggcctcgtcactgctgcccttaagctc
aagagggaggtgatcaggaagatgtacgataatgatctggctcagttgtatgcctga
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