Panicum virgatum (switchgrass): 120696828
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Entry
120696828 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 28
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120696828
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120696828
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120696828
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120696828
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120696828
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_1
EF-hand_7
EF-hand_6
PK_Tyr_Ser-Thr
EF-hand_5
EF-hand_8
EF-hand_9
EH
EF_EFCAB10_C
AIF-1
Kinase-like
Kdo
FCaBP_EF-hand
APH
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
120696828
NCBI-ProteinID:
XP_039835777
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All DBs
Position
3K:complement(3290910..3296214)
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AA seq
515 aa
AA seq
DB search
MQPDPQGPGRGKAGGANAHARLPPPVMTGSAGRPASVLPHKTANVRDHYRIGKKLGQGQF
GTTYQCVGKADGAEYACKSIPKRKLLCREDYEDVWREIQIMHHLSEHPNVVRIRGAYEDA
LFVHLVMELCAGGELFDRIVAKGHYSERAAAQLIRTIVGVVEGCHSLGVMHRDLKPENFL
FASTAEDAPLKATDFGLSVFYKPGDKFSDVVGSPYYVAPEVLQKCYGPEADVWSAGVILY
ILLCGVPPFWAESESGIFRQILRGKLDVESEPWPSISDSAKDLVRKMLIRDPTKRLTAHE
VLCHPWIVDDAVAPDKPIDSAVLSRLKNFSAMNKLKKMALRVIAESLSEEEIGGLKELFK
MIDTDNSGTITYDELKNGLKRVGSDLMEPEIQALMDAADIDNSGTIDYGEFLAATLHMNK
LEREESLVSAFAFFDKDGSGFITIDELSQACQQFGLSDVHLEDMIKDVDQNNDGQIDYNE
FAAMMRKGNAGGTGRRTMRNSLHVDLGELLKPSEN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggacccgcaaggtccgggcagggggaaggcgggtggcgccaatgcgcacgcg
cggctgccgccgccggtgatgacggggtcggcggggcggccggcatcggtgttgccgcac
aagacggccaacgtgcgcgaccactaccgcatcgggaagaagctgggtcaggggcagttc
ggcaccacgtaccagtgcgtgggcaaggcggacggcgccgagtacgcctgcaagtccatc
cccaagcgcaagctgctgtgccgcgaggactacgaggacgtatggcgcgagatccagatc
atgcaccacctctccgagcaccccaacgtcgtccgcatccgcggggcctacgaggacgcg
ctcttcgtgcacctcgtcatggaactctgcgccggcggcgagctcttcgaccgcatcgtc
gccaaggggcactacagcgagcgcgccgccgcgcagctcatcagaaccatcgtcggggtg
gtggagggatgccactcgctcggcgtcatgcaccgggacctcaagccggagaacttcctc
tttgcgagcaccgctgaggatgccccgctcaaggccactgactttgggctatccgtgttc
tacaagcccggtgataaattttccgacgttgttggtagcccttattatgttgcccctgag
gtgcttcagaaatgctatggcccagaagctgatgtctggagtgctggagtgattctgtat
attttgctatgtggtgtacccccattctgggcagagagtgaatctgggatcttcaggcag
attttgagaggcaaacttgacgtggaatctgaaccgtggccaagtatctctgatagtgct
aaagatctagtccgtaagatgcttatccgggatcctacgaagagattgactgctcatgag
gttctatgtcatccttggattgttgatgatgctgttgcacctgacaagcctattgattct
gctgttctgtcaaggctgaaaaacttctctgcaatgaacaagctcaagaagatggcattg
agggtgattgctgaaagcctttctgaggaggagatcggaggcttaaaggagttgttcaaa
atgatcgatactgacaacagtgggacaataacttatgatgaactgaagaacggtctaaaa
agggtggggtcagatctgatggaacctgaaatccaggctttaatggatgcagctgatatt
gataatagtggaaccattgactatggagagttcttagcagctacattgcacatgaataaa
ctagagagggaggaaagtttggtgtcagcatttgcattctttgataaagatgggagtggc
ttcataacaattgatgagctctcacaagcatgccaacagtttggtctttctgatgttcat
cttgaggatatgatcaaagatgtggaccaaaacaatgatggacaaattgattataacgag
ttcgctgcaatgatgagaaagggcaatgctggtggaactggaaggcgaaccatgcggaac
agcttgcatgtggatcttggtgaactcttgaagccttctgagaactaa
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