Panicum virgatum (switchgrass): 120696829
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Entry
120696829 CDS
T07260
Name
(RefSeq) probable sodium/metabolite cotransporter BASS1, chloroplastic
KO
K03453
bile acid:Na+ symporter, BASS family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
120696829
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Gene cluster
GFIT
Motif
Pfam:
SBF
SBF_like
Motif
Other DBs
NCBI-GeneID:
120696829
NCBI-ProteinID:
XP_039835778
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Position
3K:complement(3301485..3304634)
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AA seq
397 aa
AA seq
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MAPPLLLLPLRPLPSARPASRPVPRLRLHLPFTKRHRLPAAFRVQCRAEQGPAAPAPRWH
AALAAAAGLYPAYVTAGASVAIARPEAFRWFVDMAPGSYTATLGFIMLATGLTLQLKDFA
ALLRDRPLAILFGCAAQYTIMPAVGSIISRALGFPPSLSAGLILLGCCPGGTASNVVTLV
AQGDVPLSIVMTVCSTLAAVFLTPLLTKILAGAYIPVDAVKLSLSTLQVVVAPILLGSSI
QTAFPSVVQFVTPFAPLMAVLASSLLACSVFSENFVRIRSTIADASSVNGNFFSGDIGVI
MLSVILLHFAGFFIGYAAAAIGGLKEKQRRAISIEVGMQNSSLGVVLAAAHFSSPLVTLP
PALSAVIMNIMGSTLGLVWQYIKPSGSENETTDMRNA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcctcttctcctcctccccctccgccccctcccgtccgcgaggcccgcgtcc
cggccagtgccacggctgcgccttcatctccccttcaccaagcgccatcgcctccccgcc
gccttccgagtccaatgccgcgcggagcaggggcccgccgcgcccgcgccgcggtggcac
gcggcgctggccgcggcggccggtctgtacccggcctacgtcacggccggcgcgtcggtc
gccatcgcgcggcccgaggcgttccggtggtttgtcgacatggcgccggggtcctacacc
gccacgctcggcttcattatgctcgccacgggtctcaccctccagctcaaggacttcgcc
gccctcctccgcgataggcccctcgccattttgtttgggtgcgctgcgcagtacactata
atgcctgcggttgggtcgatcattagccgcgcgctggggttccccccatccctctcagct
ggcctcatcctgctgggatgctgtcctggaggaactgcatccaatgtggtgactttagtt
gctcaaggggatgttccattatccatcgtgatgactgtctgcagcactcttgctgcagtg
ttccttacacctctgctaacgaaaattctagctggtgcttacattcctgtggatgccgtc
aaactttctctcagtactttgcaggtggtagttgccccaattctattaggttcttctata
caaacagcatttccatcagtagttcaatttgtgactccttttgcacctctgatggcagtc
ttggcttcatcacttctcgcgtgcagtgtcttctctgagaattttgtacggataagatca
acaattgctgatgcatcttctgtgaatggaaacttcttctctggggacattggagttatc
atgctctctgtcatcttgctgcattttgctggtttctttatcgggtatgcagcagcggca
ataggtggtttgaaagaaaaacaaaggagagcaatatcaattgaggtaggaatgcaaaat
tcatccttaggggtagtgctagcagctgcacatttctcctcaccgttggtcaccctgcca
cctgcactctcagctgtcatcatgaacataatgggcagcacactaggtctcgtatggcaa
tatatcaaaccttctggttcagagaatgaaaccactgacatgcgcaatgcatga
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