Panicum virgatum (switchgrass): 120696901
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Entry
120696901 CDS
T07260
Name
(RefSeq) transcription factor CSA-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120696901
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120696901
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF6581
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
120696901
NCBI-ProteinID:
XP_039835865
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All DBs
Position
3K:4002589..4004075
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AA seq
229 aa
AA seq
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MMPINRWNRTTIDASCAPGQLIDLAGKSCRLRWFNQLDPRINRRPFTVAEEERLLQAHRA
HGNRWALISRLFPGRTDNAVKNHWHVVMARRRRSHQRSAGGGTHLAAAPGTGCSPPPRLP
PFQCFHFGAPPPASAKTTTTGNLCFARPGSGPSSLVSSSSGTFSVRNCHVANNFAFSSPR
EAAAAAPEDDHRHGMVKDEHAGNDDDEDGGGAAATKKDVPFIDFLGVGI
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaattaatagatggaaccgaacaaccattgatgcatcatgtgcaccagggcaa
ctgatcgatttggcagggaagagttgccggctccggtggttcaaccagctggacccacgg
atcaaccggcggcccttcacggtggcggaggaggagcggctcctgcaggcgcaccgcgcc
cacggcaaccggtgggcgctcatctcccgcctcttccccggccgcaccgacaacgctgtc
aagaaccactggcacgtcgtcatggcgcgccgccgccgcagccaccaacgctccgccggc
ggcggcacccacctcgccgccgcccctggaactggatgctcgcctccgccacgtctcccg
ccgttccagtgcttccacttcggcgccccgccgcctgcgtcggcaaagaccaccaccacc
ggcaacctgtgtttcgccaggcccggttccgggccgtccagcctcgtcagcagctcatca
ggaacgttcagtgtcaggaactgccacgttgccaataacttcgccttctcttctccaagg
gaagcggcggcggctgcaccggaggacgaccatcgtcatggcatggtcaaagacgaacat
gccggtaacgacgatgacgaagatggtggcggcgccgctgcgacgaagaaggatgtgccg
ttcatcgacttcctgggagtcggcatctga
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