Panicum virgatum (switchgrass): 120697030
Help
Entry
120697030 CDS
T07260
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03250
Viral life cycle - HIV-1
pvir03272
Virion - Hepatitis viruses
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120697030
03272 Virion - Hepatitis viruses
120697030
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120697030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120697030
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120697030
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
120697030
Exosome [BR:
pvir04147
]
Exosomal proteins
Proteins found in most exosomes
120697030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
DUF1707
UQ_con
RWD
DUF8621
Motif
Other DBs
NCBI-GeneID:
120697030
NCBI-ProteinID:
XP_039836055
LinkDB
All DBs
Position
3K:complement(5379078..5381487)
Genome browser
AA seq
332 aa
AA seq
DB search
MATAAAVGTVVLVDAALAPYEHPDLRWLVRKHVLAVLQEFPTLSPSVDTYTSDDGASTVL
LNARGLLAVSPALPPVLLTLWLPREYPYRPPLVYALPAAPSASLVPDHPFVDHRTGRVHR
TLPYLDEWSVPTSSLAGLVRSLVAALRMCHPLKSTFGFADATTAGATPVEEERRRMHAVL
ANELASRLGRDAAAFRGGVDGDIHALSSLQAGLRARGDAMGRAVRDLEEERMRLERAVTA
SLAHRGQLLAWLCTASRAPDPGAALAPHAAAGDAPRWLESKASELAADDAMDALGHALEN
GDLSFQEYIKRVKVLAREQFFHCYAASTSMNA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggctgccgtcggcacggtggtgctggtggacgcggcgctggccccgtac
gagcaccctgacctccggtggctcgtccggaagcacgtcctcgccgtcctccaggagttc
cccaccctctcgccctccgtcgacacctacaccagcgacgacggcgcctccaccgtgctg
ctcaacgcgcggggcctcctcgccgtctcccccgccctgccgccggtcctcctcaccctg
tggctccccagggagtacccctaccgcccgccgctcgtctacgcgctccccgccgcgccg
tcggcgtcgctcgtccccgaccaccccttcgtcgaccaccgcaccggccgcgtccaccgc
acgctgccgtacctcgacgaatggagcgtgccgacctccagcctcgccggcctcgtgcgg
agcctcgtcgcggccttgaggatgtgccacccgctgaagtccaccttcggcttcgccgac
gcgacgaccgccggagcgacgccggtggaggaggagcggcggcgcatgcacgccgtgctg
gccaacgagctcgcctcgaggctgggcagggacgcagcggccttccgcggcggcgtcgac
ggggacatccatgccctgtcctcgctgcaggccggcctccgggcacgcggcgacgccatg
ggccgcgccgtccgcgacctggaagaggagaggatgcggctggagcgcgccgtgacggcc
agcctcgcccaccgcggccagctgctcgcctggctgtgcacggcgagccgcgcgcccgat
ccgggagcggcgttggctccgcacgcggccgcgggcgacgcgccgcggtggctggagagc
aaggcgtcggagctcgccgcggacgacgccatggacgcccttggccacgcgctggagaac
ggggacctcagcttccaggagtacatcaagcgcgtcaaggtcctcgccagggagcagttc
ttccattgctacgcagcgtccacgtcgatgaacgcctaa
DBGET
integrated database retrieval system