Panicum virgatum (switchgrass): 120697083
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Entry
120697083 CDS
T07260
Name
(RefSeq) probable calcium-binding protein CML18
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120697083
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Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_9
Dockerin_1
AIF-1
SPARC_Ca_bdg
EF-hand_4
T2SSK
LEM
DUF3037
Motif
Other DBs
NCBI-GeneID:
120697083
NCBI-ProteinID:
XP_039836150
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Position
3K:5953457..5954497
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AA seq
174 aa
AA seq
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MASVKQGGDAAKGAGGGGGLGMPAAEVEQVFRRYDANGDGKISAEELASVLRALGAPPGP
GEVRRMMDEMDTDRDGFVDLAEFVAFHCAARPEGEDEDGGAAEAELREAFRMYDADRNGL
ISARELHRVLRQLGDKCSVADCSRMIRSVDADGDGSVNFDEFKKMMGAGTGARR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgtcaagcagggcggcgacgcggcgaagggcgcgggaggcggagggggcctc
gggatgccggcggcggaggtggagcaggtgttccggcgctacgacgccaacggcgacggc
aagatctcggcggaggagctggcgtccgtgctgcgggcgctgggcgcgccgccggggccc
ggggaggtgcgccgcatgatggacgagatggacaccgaccgcgacggcttcgtcgacctc
gccgagttcgtcgccttccactgcgccgcccggccggagggggaggacgaggacggcggc
gccgcggaggccgagctgcgcgaggccttccgcatgtacgacgccgaccgcaacggcctc
atctccgcgcgggagctccaccgcgtcctgcgccagctcggggacaagtgctccgtcgcc
gactgctcccggatgatccgctccgtcgacgccgacggcgacggcagcgtcaacttcgac
gagttcaagaagatgatgggcgccggcaccggagccaggcgctag
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