Panicum virgatum (switchgrass): 120697087
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Entry
120697087 CDS
T07260
Name
(RefSeq) ATP-dependent DNA helicase DDX11-like
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120697087
Enzymes [BR:
pvir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120697087
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
120697087
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA
Sial-lect-inser
Motif
Other DBs
NCBI-GeneID:
120697087
NCBI-ProteinID:
XP_039836156
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All DBs
Position
3K:complement(6087296..6093726)
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AA seq
871 aa
AA seq
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MPPPPPPPRKEFPAFPFAPYPIQSEFMSFLYGALSSGPGALALLESPTGTGKTLSIICSA
LQWLLDRRAAAAATAPAHPGGGAAPGEDDDEPDWMRDFTPLPPEKEVTKKKKKKTKPPAM
RKTAGSGKPGGYGEQGAGDDDGEFLPEEFESDGEDGAMRGVGKRAHCGSSSSSEGESDEE
EEEEVTPKVYFTSRTHSQLSQFIGELKRTEFAGRIRTVSLGSRKNLCINKDVLKLGSANR
INERCLELQKNKKSSKTKVEDDKRKARQAKNSCGCPMLRNRSLQKEFRSKVSDQGALDIE
DLARIGRKIGTCPYYGSRDMVRSADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEAHNL
ADSLTNMYNSKITSSQLKAVLSHLDTYLNRFHDVLGAGNRRYIQTLTVLTRSFLRVLINN
QDGASTMSSMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANKTTSIQDGVNQFD
LQQEHDEGSSIACFQALVDFLRSLMNSNDDGRIIVAKQKLSGQPEEAYLKFVMLCAEKIF
SEVTQDAYAVILAGGTLQPIEETRLRLCPSLPPADIKFFTCNHIVPPESILPIAVTRGPS
GMAFDFSYNSRSSPSMIEELGRFICNIVTVVAEGVVMFFSSYDYERRVYDAWTTAGTISK
ICKKKHVFREPRNSADVEAVLNKYKETIQSCKNSQDTGINGALLLAVVGGKISEGINFSD
GMGRCVIMVGLPYPSPSDVELIETIKHIETISSSFLVGDDKASGRKYDDECELQPGYNIL
RKCTKGGREYYENLCMKAVNQSIGRAIRHINDYAAMLLVDSRYAQTSSSKSYSSPTDKLP
QWIKARLSCAKNYGEVHRLLHQFFKFNKQKR
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgcctccgccgccgcggaaggaattcccggcgttcccgttcgcgccgtac
ccgatccagtcggaattcatgtcgttcctctacggcgccctctcctccggccccggcgcc
ctcgccctcctcgagagccccaccggcaccggcaagacgctcagcatcatctgcagcgcg
ctccagtggctcctcgaccgccgcgccgccgccgccgctacggcgccggcccaccccggc
ggcggcgctgcccccggggaggacgacgacgagcccgactggatgcgggatttcacgccg
ctgccgccggagaaggaggtcacgaagaagaagaagaagaagaccaagcctccggcgatg
aggaaaacggccggttcgggcaaacccggcgggtatggggagcaaggcgccggcgacgac
gatggggagttcctgccggaggagtttgagagcgacggcgaagacggcgcgatgcgcggg
gtggggaagcgtgcacattgcggcagtagcagcagcagcgagggcgagtcggatgaggaa
gaggaggaggaggtgacgcccaaggtttacttcacgagccgcacgcactcgcagctgtcg
cagttcattggggagctcaagaggacggagtttgcggggaggatcaggacggtgtccttg
gggtccaggaagaacttgtgcatcaacaaggatgttctgaagcttggcagtgcaaaccgg
attaatgagaggtgcttggaactgcagaagaacaagaagagcagcaaaactaaggttgag
gatgataaaagaaaggcacgccaagcaaagaactcttgtgggtgcccaatgttaagaaat
agaagcctacagaaagagttcaggagcaaagtgtcagaccaaggtgcattagacatcgag
gatttggcgcggataggaaggaagattggaacatgcccctactatggttcacgagacatg
gtccgctcagctgaccttgtagtccttccttatcaatctttattgctgaagtctgctaga
gaatcgcttggccttaatctgaagaacagtgttgtcatcatagatgaggctcacaactta
gctgattctctgaccaacatgtacaattcaaagattacatcttctcagttgaaggcagtt
ctttcccacctcgatacataccttaatagatttcacgatgttttgggagctgggaatcga
cgatacatccagaccttgacagttttaacaaggtctttcctacgagttttgatcaacaat
caagatggtgccagcactatgtcttctatgaccataaaccaattcttgttttcccttgac
atcgataacataaatatagtgaaactttgtcagtatgtaaaagaaagcaatataattcac
aaggttagtggatatgccaataagacaactagcatccaagatggtgtaaatcagtttgat
ctccagcaggaacatgatgaaggaagcagtatagcatgttttcaggcattggttgacttt
ctacgctcccttatgaacagcaatgatgatggaagaatcattgttgcaaagcaaaagctc
agtggacaacctgaagaagcatatcttaaatttgtgatgctttgtgcggaaaaaatattt
tcagaggtcactcaggatgcttatgctgttatcctggctggtggaaccctccagcctatt
gaagaaactaggctacgcttgtgtccaagcttaccaccagctgatataaaattctttacg
tgcaaccatattgttcctcctgagagtattcttccaatagctgttacacgtggaccctca
ggcatggcatttgatttcagctacaattcaaggagctctccttccatgattgaagagctt
ggacgtttcatctgcaatattgtaacagttgtggctgagggagttgttatgtttttttct
tcttatgattatgaaaggcgtgtatatgatgcatggactactgcaggaacaatttccaag
atttgtaaaaagaaacatgttttcagagaaccaaggaacagtgctgatgttgaggctgtc
ctcaacaaatacaaggagacaattcaatcatgtaaaaattcccaagacacaggcataaat
ggggcacttttattagccgtcgttggtggtaagatttctgaaggcataaacttcagcgat
gggatgggtcgttgtgtaataatggttggcttgccttatccaagtccatctgatgttgag
ctgatagagacgataaagcatatcgaaactatttctagctcatttttggttggagatgat
aaggcctcagggagaaaatatgatgatgaatgtgaacttcagcctggttacaatatatta
cggaagtgcactaaaggtggaagagagtattatgagaacctgtgcatgaaagctgtgaat
caatctattggcagagcgatcaggcacataaacgattatgctgcaatgcttttggttgac
tctcgttatgcacagacttcatcaagcaagagttattccagcccaactgataagcttcct
caatggataaaagcacgactctcttgtgcaaaaaattatggtgaagtccatagactgttg
catcagttcttcaaatttaataaacaaaagcgttga
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