Panicum virgatum (switchgrass): 120697136
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Entry
120697136 CDS
T07260
Name
(RefSeq) MADS-box transcription factor 3-like isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120697136
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
120697136
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GFIT
Motif
Pfam:
SRF-TF
K-box
GIT_CC
NET2A
CC149
DUF6262
Motif
Other DBs
NCBI-GeneID:
120697136
NCBI-ProteinID:
XP_039836198
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Position
3K:6696701..6704880
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AA seq
287 aa
AA seq
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MHIQEVQATPSTDIMQWGFSGQTTLTSTTGLKLKEPAVSSPGSGSVGAAAAAEKNGRGKI
EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKATI
ERYKKATSDNSSAAGTVAEVTIQHYKQESDRLRQQITNLQNSNRTLVGDSIATMSHKDLK
QLEARLDKGLVKIRARKNEVLSSELEYMQRREMELQNDNLYLRSRVEENERAQQTVNMMG
APSTSEDQQGFIPYDPIRSFLQFNIMQQQPQFYSQQEDRKDFNLGGR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcatatccaagaagtgcaggctacaccatccacggacatcatgcagtggggtttctcc
gggcagactaccttgacttcaacgacaggtctcaagctgaaggagccggcggtgtcgtct
ccgggctcaggctcggtcggagctgctgctgctgcagagaagaacgggaggggcaagatt
gagatcaagcgcatcgagaacacgaccaaccgtcaggtcaccttctgcaagcgccgcaat
ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgccctcatt
gtcttctccagccgcggccgcctctacgagtactccaacaacagcgtgaaggcaaccatt
gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacggttgcagaggtc
actatccagcactacaagcaggaatctgataggctgaggcagcagatcaccaacttgcag
aactccaacaggaccctggtaggtgattcaattgcaaccatgagccacaaggaccttaag
cagctagaggctaggttggacaaaggcctggtaaagattagagcaagaaagaatgaggtg
ctatcttctgaactcgagtatatgcagaggagggaaatggagttgcagaatgataacttg
tacttaaggagcagggttgaggagaatgagagggcacagcagacagtgaacatgatgggg
gcgccgtcgacgagtgaggaccagcaaggtttcattccttatgacccaataagaagcttc
ctgcagttcaacatcatgcagcagcagcctcaattttactcccagcaggaggaccggaaa
gacttcaacctaggtggaagataa
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