Panicum virgatum (switchgrass): 120697154
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Entry
120697154 CDS
T07260
Name
(RefSeq) transcription factor LAF1-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120697154
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120697154
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
120697154
NCBI-ProteinID:
XP_039836255
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Position
1K:complement(1160406..1162249)
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AA seq
292 aa
AA seq
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MGCRSCEKPKMNYRKGLWSPEEDQRLRDYILKHGLGCWSAVPAKAGLQRNGKSCRLRWIN
YLRPGLKRGMFSQEEEDVVINLQAKLGNKWSQIAMHLPGRTDNEVKNYWNSYLKKRVMQA
QGGSNPKSPAELTSMSTTEPAMSMSMSMHHHHHAKNSSGSTTTSHDQDANISSNGLSGPA
PLAQQPFDHQAQQQPKNFVFSDWVPKPESYSVCTHWPASTASSGNVTPSHGGAFGDQMSG
SYGALPPHPDNQAVVGSHGAAATGIAGSGYFDLLNMGDIYGGFSSTNDDLLF
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggggtgccggtcctgcgagaagcccaagatgaactaccggaaggggctgtggtcacct
gaggaggaccagaggctcagggactacatcctcaagcatggcctcggctgctggagtgct
gttcccgcaaaggctggtctccagagaaacggcaagagctgccgcctgcgttggatcaac
tacttgaggcccggattaaagcgtggaatgttctctcaggaggaggaagacgtcgtcatc
aaccttcaagccaagctgggcaacaagtggtcgcagattgcgatgcatctgcccgggagg
accgacaacgaggtgaagaactactggaactcgtacctgaagaagagggtgatgcaggcc
cagggcggctccaaccccaagagcccagccgagctcacctccatgagcaccaccgagccg
gccatgtccatgtccatgtccatgcaccaccaccaccacgccaagaacagcagcggcagc
accacgacgtcgcacgaccaagacgccaacatcagcagcaacggcctgtcaggccctgcg
cccctagcccagcagccgttcgatcaccaggcgcagcagcagcccaagaacttcgtcttc
tccgactgggtgccgaagccggagagctactcggtgtgcacgcactggcccgcctccacg
gcgagctccggcaacgtgacgccgtcgcacggcggcgccttcggggaccagatgagcggc
agctacggcgcgctgccgccgcacccggacaaccaggccgtcgtcggcagccatggcgcc
gccgccaccggcattgcaggtagcgggtactttgatctgctcaacatgggggacatctac
ggggggttcagctcgacgaacgatgatctgctcttctga
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