Panicum virgatum (switchgrass): 120697285
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Entry
120697285 CDS
T07260
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120697285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120697285
Spliceosome [BR:
pvir03041
]
Common components
Common spliceosomal components
SR proteins
120697285
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
120697285
NCBI-ProteinID:
XP_039836381
LinkDB
All DBs
Position
3K:8106908..8113899
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AA seq
315 aa
AA seq
DB search
MPRYDDRYGNTRLYVGRLSSRTRTRDLEYLFSKYGRIREVELKRDYAFIEFSDPRDADDA
QYNLDGREVDGSRIIVEFAKGVPRGSGSSREYMGRGPPPGTGRCFNCGIDGHWARDCKAG
DWKNKCYRCGERGHIERNCQNSPRNLRRERSYSQSPSPRRGRGRSRSYSRSRSYSRSRSP
SGSPRGGRRDRDERRSRSLSYSRSPRRSASPSAKEKERSPTPNGSRSPRSPSSRDQVSPP
PKDNGERNGSDRGDSPVRRENSRSRSRSRSPSDGYRSPAANGRSPSPRDDRSPSPKGNAG
DDDGGRGSPRGSQSP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctatgatgatcgttatgggaacacacgcttgtatgttggcagactatcctcc
cgcactcgtacccgtgacctggaatatcttttcagcaaatatggaagaatacgagaagtg
gagttgaagcgcgactatgcatttattgaattcagcgatcctcgtgatgctgatgatgca
caatacaacctagatggcagggaagttgatggcagccgcattatcgttgagtttgctaaa
ggggttcctcgtggttctggcagctcacgcgagtacatgggaagagggcctccgccaggg
acaggtcgctgttttaactgtggaattgatggtcactgggcaagggattgcaaggctggt
gactggaagaacaaatgctaccgttgtggagaaaggggccacatagaaagaaattgccag
aacagtccaaggaatctgaggcgcgagagaagttattcacagtcaccatctccacgccgt
ggacgggggcgcagccggagctacagcagaagccggagctatagccgttctagatcccca
tctggatctcccaggggtggacgccgagaccgtgatgagaggagatcaaggagtcttagc
tacagcaggagccccaggcgttctgcttcaccaagtgcaaaggaaaaggagcgcagcccc
acacctaatggcagtaggagcccaaggagtcccagctcaagggatcaggtgagcccgcca
ccaaaggacaatggtgaacgcaatggctcagaccgtggtgacagccctgtgaggagggag
aacagcaggagcaggagcaggagccgtagcccatctgatggctaccgtagccctgcagcc
aatgggcgcagcccgagccctagagatgaccggagccctagtcccaaaggcaacgctggt
gatgatgatggcggccgtggttcaccaagaggaagccagtccccctga
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