Panicum virgatum (switchgrass): 120697341
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Entry
120697341 CDS
T07260
Name
(RefSeq) metal tolerance protein 1-like isoform X1
KO
K14689
solute carrier family 30 (zinc transporter), member 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120697341
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC30: Zinc efflux transporter
120697341
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GFIT
Motif
Pfam:
Cation_efflux
Zip
DUF5134
FAM176
Motif
Other DBs
NCBI-GeneID:
120697341
NCBI-ProteinID:
XP_039836452
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Position
3K:complement(8796273..8799848)
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AA seq
415 aa
AA seq
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MMESHSSSHPQIAEVKMDISPSASGAAGNKICRGAACDFSDSSNSSKDAKERSASMRKLI
IAVILCIIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPQQSYG
FFRIEILGALVSIQLIWLLAGILVYEAIVRLINESGEVQGSLMFAVSAFGLFVNIIMAVL
LGHDHGHGHGHSHGHGHGHSHDHSHGDSDDDHEEQEQGHVHRHEHSHGSSITVTTHHHHH
PSTGQHRDAEEPLLKHEGTQSAAKSAKKQRRNINVHSAYLHVLGDSIQSVGVMIGGAIIW
YKPEWKIIDLICTLIFSVIVLFTTIRMLRNILEVLMESTPREIDATRLEMGLCEMDGVVA
VHELHIWAITVGKVLLACHVTIAREADADQILDKVIGYIKTEYNISHVTIQIERE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaagccatagttcatcacatcctcagattgctgaagtgaaaatggacatctca
ccgtcagcttctggagcagcagggaacaaaatctgcagaggtgctgcctgtgatttctct
gattccagtaacagctcgaaagatgccaaggagagatccgcatccatgaggaagcttata
attgccgtgatcctttgtatcatattcatgacagtggaagttgttggcggcatcaaagca
aacagtcttgcaatcttaactgatgcagctcatcttctttctgatgtggcagcttttgcc
atatcactattctctctttgggctgctggatgggaagcaacaccacaacagtcttacggg
ttctttcgtattgagattcttggtgcattggtctccattcagctcatatggttgcttgct
ggcatactcgtatatgaggctattgtaaggctcattaatgagagcggcgaggtgcagggc
tccctcatgtttgctgtatcagcttttggattatttgtcaacatcataatggctgtactt
ctggggcatgaccatggacacggccatggccacagccatggtcatggccatggacattca
catgatcatagccatggtgattcagatgatgaccatgaagaacaagagcagggccatgtg
catcgccacgagcacagccatggaagttctattactgtcacaacccatcaccaccaccac
ccaagcactggacaacatcgtgatgctgaggaaccattgcttaagcatgagggtacccag
tctgctgccaaatctgctaagaaacaacgccgaaatatcaatgtacacagtgcttatctt
cacgtgcttggagattcgatccagagcgtcggggtaatgattggtggggctatcatctgg
tacaagcctgagtggaagatcattgatctcatctgcaccctcatcttctctgtgattgta
ctgttcaccacaatcaggatgctgcgcaacatacttgaagtactgatggagagcactccc
cgtgagattgatgccaccaggctcgagatggggctctgcgagatggatggtgtggttgct
gtccacgagcttcatatctgggccatcacagtagggaaggtgctcctagcatgccatgtg
acaatagcaagggaagccgacgctgatcagatccttgacaaggtgatcggatacatcaag
acagagtacaacatcagccatgtgaccattcagatcgagcgcgagtag
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