KEGG   Panicum virgatum (switchgrass): 120697406
Entry
120697406         CDS       T07260                                 
Name
(RefSeq) LEC14B homolog isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120697406
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     120697406
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_HPS5 WDR54 PROPPIN Cytochrom_D1 Beta-prop_IFT122_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 WD40_like WD40_2 F420H2_quin_red
Other DBs
NCBI-GeneID: 120697406
NCBI-ProteinID: XP_039836568
LinkDB
Position
3K:9673399..9680819
AA seq 468 aa
MRGVRRSTRGEAPRKADRELDRFAMTNEVFHLTRARSEPCHRTRGAASARGRRPFSTFGL
MSARESGRTGGAGFSLADRAYVGSRHIPTKGPWIVDEVDSEAYVSQFSADGSLLVAGFRG
SRIRVYNADRGWRIHKDISCRSLQWTVSDIALSPDQQFLAYASLSPIVHIVNVQSSGKES
HANVNEIHEGLHFTSDENAYEDFGIFSVKFSKDGKEVVIGNNERSIYVYDLAANKVSVRI
RAHTDDVNAVTFADESGNLLYSGSDDSLCKVWDRRCLAGEKSAGILTGHLDGVTFIDSRG
DGRYFISNCKDQRIKLWDIRKMSSVVKVRPVRIVDWDYRWMPFPSEAQHVKHPNDQSLAT
YRGHSVLQTLVRCYFSPMHSTGQRYIYTGSSDKSVHIYDVVSGKTVERLSWHSSVIRDCT
WHPCYPTIVTSSWDGYVARWEASGDENSLADEQRASPYFQPYGDPFMM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgcgaggagtacggcggagtactcgcggggaggcgccccggaaggcagaccgcgagttg
gaccggttcgccatgaccaacgaggtgttccacctcaccagggcccggtcggagccctgc
caccggactcgcggtgcggcttccgcccgcgggaggaggcccttctcgactttcgggctc
atgtcggcgagggagtctggccgcacgggcggcgccgggttctcgctggccgatcgcgcc
tatgttggcagcaggcacatcccgacgaaagggccgtggatcgtcgacgaagtggacagc
gaggcctacgtttcgcagttctctgctgatgggtcgttgctcgtcgctgggtttcgggga
agccgcatcagagtttacaatgccgatagagggtggaggattcataaggatataagctgc
agaagtctgcagtggacagtttcagatattgctctttcaccagatcaacaattccttgcc
tatgcaagtttgtcacctattgttcacattgtgaatgtgcagagttctggaaaggaatca
catgctaatgttaatgaaattcatgagggattgcatttcaccagcgatgaaaatgcctat
gaggactttggaatattttctgttaaattctccaaagatggtaaagaagttgttattggg
aacaatgaaagatcaatatatgtttatgaccttgcagcaaataaagtgtcagtccgcatc
cgtgctcatactgatgatgtcaatgcagttaccttcgctgatgaaagcggcaatttgttg
tactctgggagtgatgatagtctctgtaaggtgtgggacaggcgttgccttgctggggaa
aaatcagccggtattttgacaggtcatttagatggagttacatttattgatagccgtggt
gatgggcggtatttcatctccaattgcaaggatcagagaatcaaactttgggacatcagg
aaaatgtcttctgtcgtgaaagttcgcccagtgagaatagtggactgggactataggtgg
atgccattcccatcagaagcacaacatgttaagcatccaaatgatcagtctttggccaca
tacagaggtcattcagttctgcaaacacttgtccgttgctacttctctcctatgcacagc
acgggccagaggtacatatacacaggatccagtgacaagtctgtacatatttatgatgtg
gtaagcgggaagaccgttgagaggctctcatggcatagctcagtcatcagagactgcacc
tggcatccatgctacccaacgatcgtcacctcatcctgggatggttatgttgcccggtgg
gaggcctcaggtgatgaaaatagccttgccgatgagcagagggcaagcccttacttccag
ccatacggtgatcccttcatgatgtag

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