Panicum virgatum (switchgrass): 120697441
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Entry
120697441 CDS
T07260
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120697441
04120 Ubiquitin mediated proteolysis
120697441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120697441
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
120697441
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
120697441
NCBI-ProteinID:
XP_039836623
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Position
3K:complement(9932921..9939400)
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AA seq
744 aa
AA seq
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MAGQERRTIDLEEGWAFMQKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHD
YSQQLYDKYRESFEEYITSMVLPSLREKHDEFMLRELVQRWSNHKVMVRWLSRFFHYLDR
YFISRRSLTPLKEVGLTCFRELIYQEIKGQVKDAVIALIDKEREGEQIDRALLKNVLDIF
VEIGLGQMDCYENDFEDFLLKDTTEYYSVKAQSWILEDSCPDYMIKAEECLKREKERVGH
YLHISSEQKLLEKVQNELLAQYATPLLEKEHSGCSALLRDDKVEDLSRMYRLFSKITRGL
EPISNMFKTHVTNEGTALVKQAEDSASSKKPEKKDMVGMQEQVFVWKIIELHDKYVAYVT
DCFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGCSEKLSDEAIEDALE
KVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGM
VTDLTVARDHQTKFEEFVAGHPELNPGIDLAVTVLTTGFWPSYKTFDINLPAEMVKCVEV
FKEFYQTRTKHRKLTWIYSLGTCNINAKFDAKPIELIVTTYQAALLLLFNGADRLSYSEI
VTQLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSKFTDRMRRIKIPLPP
VDEKKKVVEDVDKDRRYAIDASIVRIMKSRKVMGHQQLVAECVEQLSRMFKPDFKAIKKR
IEDLITRDYLERDKDNANMYKYLA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcaggagcggaggacgatcgatctggaggagggatgggccttcatgcagaag
ggcatcaccaagctgaagaacatcctcgagggcaagcccgagccgcagttcagctccgag
gactacatgatgctctacacgacgatatacaacatgtgcacgcagaagccgccgcacgac
tattcgcagcagctctacgacaagtaccgcgagtccttcgaggagtacatcacctccatg
gtactaccttcgttaagggagaagcatgatgagtttatgttgagggagctagtgcaaagg
tggtcaaaccataaagtcatggttcggtggctctcacgcttctttcattaccttgatcgg
tacttcatctcaagaaggtcacttaccccacttaaagaagttgggcttacttgcttccga
gagttgatttatcaagagattaaaggacaagtaaaagatgcagtgatagctctgatagac
aaagagcgtgaaggtgaacagattgacagggctttattgaagaatgtcttggacatattt
gttgaaattgggctgggtcaaatggattgttacgagaatgactttgaagacttcttgctt
aaggatactacagagtactactctgtcaaggctcaaagttggatccttgaggactcctgt
ccagattatatgatcaaggctgaggagtgtttgaagcgggagaaggagcgagttggtcac
tatttgcatattagcagtgaacagaagttattggagaaagtgcaaaatgaattgcttgct
caatatgcaactccgctgttggagaaagagcattctggatgttctgctttgcttcgtgat
gataaggttgaggatctttctaggatgtacaggctcttctccaaaatcacccgtggcctg
gaacctatttctaatatgttcaaaacgcatgtcacgaatgagggtacagccttggtcaag
caagcagaagattctgctagtagtaagaagccagagaagaaggatatggttggcatgcag
gaacaggtctttgtgtggaaaatcatcgagttgcatgacaaatatgtggcttatgtgaca
gattgtttccagggccatacactcttccataaggcacttaaagaagcctttgaggtcttc
tgtaacaagggtgtctctggtagttcgagtgctgaattgctggctaccttctgtgacaat
attctgaagaaaggctgcagtgaaaagctcagtgacgaagccattgaagacgcccttgag
aaggtggtgagattgctggcttacattagtgataaagatctctttgctgagttctatagg
aagaaacttgcaagaagattgctttttgacaaaagtgccaatgacgaacatgagagaagc
atcctgacaaagctcaagcaacagtgtgggggccagtttacttcaaaaatggagggcatg
gttacagacctcaccgtcgccagagatcatcaaactaaatttgaagagtttgtagctgga
catccggagttgaatcctgggatagacttggctgttactgttttgacaacaggattctgg
ccaagctacaaaacctttgatataaatcttcctgctgagatggtgaaatgtgtagaggtt
ttcaaggagttctaccaaacaagaacaaagcacaggaaacttacctggatttattccttg
ggcacctgtaacatcaatgccaagtttgatgccaagcctattgaactaattgttacgaca
tatcaggctgcattgctactgctattcaatggagccgataggcttagttattctgagatt
gtaactcaactaaacttgtcagatgatgatgtagtgcgcttgctccattcactctcttgt
gctaaatacaagattcttaacaaagagccagcaaacagatccatctcccccaacgatgtg
tttgagttcaattcaaaattcaccgacagaatgagaagaattaagattcccctcccccct
gtcgatgagaagaaaaaagttgtcgaagatgttgacaaagataggaggtatgcaattgat
gcatcaattgtgcgcatcatgaagagccgtaaagttatgggtcatcagcagctagttgcg
gaatgtgttgagcagctcagccgtatgttcaagccggacttcaaagccatcaagaagagg
attgaggatctcatcacaagggactacttggagcgcgacaaggacaatgcgaacatgtac
aaatacctggcttga
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