KEGG   Panicum virgatum (switchgrass): 120697441
Entry
120697441         CDS       T07260                                 
Name
(RefSeq) cullin-1-like
  KO
K03347  cullin 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04120  Ubiquitin mediated proteolysis
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120697441
   04120 Ubiquitin mediated proteolysis
    120697441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120697441
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     120697441
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 120697441
NCBI-ProteinID: XP_039836623
LinkDB
Position
3K:complement(9932921..9939400)
AA seq 744 aa
MAGQERRTIDLEEGWAFMQKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHD
YSQQLYDKYRESFEEYITSMVLPSLREKHDEFMLRELVQRWSNHKVMVRWLSRFFHYLDR
YFISRRSLTPLKEVGLTCFRELIYQEIKGQVKDAVIALIDKEREGEQIDRALLKNVLDIF
VEIGLGQMDCYENDFEDFLLKDTTEYYSVKAQSWILEDSCPDYMIKAEECLKREKERVGH
YLHISSEQKLLEKVQNELLAQYATPLLEKEHSGCSALLRDDKVEDLSRMYRLFSKITRGL
EPISNMFKTHVTNEGTALVKQAEDSASSKKPEKKDMVGMQEQVFVWKIIELHDKYVAYVT
DCFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGCSEKLSDEAIEDALE
KVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGM
VTDLTVARDHQTKFEEFVAGHPELNPGIDLAVTVLTTGFWPSYKTFDINLPAEMVKCVEV
FKEFYQTRTKHRKLTWIYSLGTCNINAKFDAKPIELIVTTYQAALLLLFNGADRLSYSEI
VTQLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSKFTDRMRRIKIPLPP
VDEKKKVVEDVDKDRRYAIDASIVRIMKSRKVMGHQQLVAECVEQLSRMFKPDFKAIKKR
IEDLITRDYLERDKDNANMYKYLA
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggcggggcaggagcggaggacgatcgatctggaggagggatgggccttcatgcagaag
ggcatcaccaagctgaagaacatcctcgagggcaagcccgagccgcagttcagctccgag
gactacatgatgctctacacgacgatatacaacatgtgcacgcagaagccgccgcacgac
tattcgcagcagctctacgacaagtaccgcgagtccttcgaggagtacatcacctccatg
gtactaccttcgttaagggagaagcatgatgagtttatgttgagggagctagtgcaaagg
tggtcaaaccataaagtcatggttcggtggctctcacgcttctttcattaccttgatcgg
tacttcatctcaagaaggtcacttaccccacttaaagaagttgggcttacttgcttccga
gagttgatttatcaagagattaaaggacaagtaaaagatgcagtgatagctctgatagac
aaagagcgtgaaggtgaacagattgacagggctttattgaagaatgtcttggacatattt
gttgaaattgggctgggtcaaatggattgttacgagaatgactttgaagacttcttgctt
aaggatactacagagtactactctgtcaaggctcaaagttggatccttgaggactcctgt
ccagattatatgatcaaggctgaggagtgtttgaagcgggagaaggagcgagttggtcac
tatttgcatattagcagtgaacagaagttattggagaaagtgcaaaatgaattgcttgct
caatatgcaactccgctgttggagaaagagcattctggatgttctgctttgcttcgtgat
gataaggttgaggatctttctaggatgtacaggctcttctccaaaatcacccgtggcctg
gaacctatttctaatatgttcaaaacgcatgtcacgaatgagggtacagccttggtcaag
caagcagaagattctgctagtagtaagaagccagagaagaaggatatggttggcatgcag
gaacaggtctttgtgtggaaaatcatcgagttgcatgacaaatatgtggcttatgtgaca
gattgtttccagggccatacactcttccataaggcacttaaagaagcctttgaggtcttc
tgtaacaagggtgtctctggtagttcgagtgctgaattgctggctaccttctgtgacaat
attctgaagaaaggctgcagtgaaaagctcagtgacgaagccattgaagacgcccttgag
aaggtggtgagattgctggcttacattagtgataaagatctctttgctgagttctatagg
aagaaacttgcaagaagattgctttttgacaaaagtgccaatgacgaacatgagagaagc
atcctgacaaagctcaagcaacagtgtgggggccagtttacttcaaaaatggagggcatg
gttacagacctcaccgtcgccagagatcatcaaactaaatttgaagagtttgtagctgga
catccggagttgaatcctgggatagacttggctgttactgttttgacaacaggattctgg
ccaagctacaaaacctttgatataaatcttcctgctgagatggtgaaatgtgtagaggtt
ttcaaggagttctaccaaacaagaacaaagcacaggaaacttacctggatttattccttg
ggcacctgtaacatcaatgccaagtttgatgccaagcctattgaactaattgttacgaca
tatcaggctgcattgctactgctattcaatggagccgataggcttagttattctgagatt
gtaactcaactaaacttgtcagatgatgatgtagtgcgcttgctccattcactctcttgt
gctaaatacaagattcttaacaaagagccagcaaacagatccatctcccccaacgatgtg
tttgagttcaattcaaaattcaccgacagaatgagaagaattaagattcccctcccccct
gtcgatgagaagaaaaaagttgtcgaagatgttgacaaagataggaggtatgcaattgat
gcatcaattgtgcgcatcatgaagagccgtaaagttatgggtcatcagcagctagttgcg
gaatgtgttgagcagctcagccgtatgttcaagccggacttcaaagccatcaagaagagg
attgaggatctcatcacaagggactacttggagcgcgacaaggacaatgcgaacatgtac
aaatacctggcttga

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