Panicum virgatum (switchgrass): 120697444
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Entry
120697444 CDS
T07260
Name
(RefSeq) anaphase-promoting complex subunit 7-like
KO
K03354
anaphase-promoting complex subunit 7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120697444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120697444
03036 Chromosome and associated proteins [BR:
pvir03036
]
120697444
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
120697444
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
120697444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_14
TPR_19
TPR_12
TPR_11
TPR_16
TPR_CcmH_CycH
TPR_20
PknG_TPR
TPR_7
Motif
Other DBs
NCBI-GeneID:
120697444
NCBI-ProteinID:
XP_039836626
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All DBs
Position
3K:9948417..9960929
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AA seq
561 aa
AA seq
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MEAARESMAALLDAGLFASAQTLGSFLVSSSGASNDAGMSMKAESLVLHGDALYGEKEFR
RALNAYKQAMQCSRSIPRQATSNIRSSVSATGRSPSPNSSNLLPFNENEVKFKIALCHSA
LCEHREALQEMEGIPSKVRTLKMNLMLGKLYRISRNSRSAVVCYKECLRHCPYVFEAITA
LAEMGLSAKEFSLLFSQAPNRGGKLPSDSLDAQRWWNWYVEAQCCIASHDYKGGLDIYLE
LMQRFPNNVHILLEIAKVEAIIGRNDEAIMNFEKARLIDPNIMTYMDEYAILLKTKFDYI
KLNKLVHDMLHIDPARPETCVALAAMWERKDERKALTYAEKSLRVDDRHITGYIMKGNLH
LSLNRPDMAVTDFRGAQELRADLRSYQGLVRAYLALAKCKDALFTAREAMKVMHQSAKAL
KLVGDVHAISSSGREKARKFYESAIRLEPGFLGAALALADLHVAEGRNREAVTLLERYVR
QWADDSVNIKLAQVYAATNMLNDALFHYQCALRINPQNEAAKKGLERLEKQMKGVDPDAP
EEDEDNEADDIDADQDDAELL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcgggagtccatggcggccctcctcgacgccggccttttcgcctccgcc
caaaccctgggtagtttccttgtgtcgtcatctggtgcgagcaacgatgctggcatgtcc
atgaaggcggaaagcctggtcctgcatggtgatgctttgtatggagagaaagagttccgt
agggcactgaatgcatacaagcaagctatgcaatgtagcagaagtatccctaggcaagca
acaagtaacatcagaagctcagtgtctgccacaggccggtcgccttctccaaattcttcg
aatctcttaccattcaacgaaaacgaggtgaagttcaagattgcactttgccattctgct
ctatgtgagcaccgtgaagcacttcaagagatggagggtattccttctaaagtgagaacg
ctgaaaatgaatctgatgttagggaagctttatcgaatatcaagaaatagccgttcagct
gttgtctgttataaagagtgcttgaggcactgcccttatgtttttgaagctattacagct
ttggcggaaatggggctttctgcaaaggaattttctttattattttcacaagcaccaaat
agaggaggcaagcttccaagtgactctttagatgcacaacgatggtggaattggtatgtt
gaggcgcagtgttgcattgcttcacatgattataaaggtggccttgacatatatctagaa
ctaatgcaacgattccccaataatgtgcatatcctgctggaaattgcaaaggttgaagcg
atcataggcaggaatgatgaagcaataatgaactttgagaaggctcggttgattgaccca
aacattatgacatatatggatgagtatgcaattctcctaaaaacaaaatttgactatatc
aaactgaacaagctggtacatgatatgctgcatattgaccccgcaagaccagagacatgt
gttgctcttgcagcaatgtgggaaagaaaagatgaaagaaaagctttgacatatgcagaa
aagagccttcgagttgatgataggcatataactggttatattatgaagggcaatctgcat
ctttcattgaaccggccagatatggcagtgaccgacttcagaggagctcaagaattgagg
gctgatcttcgttcttatcaaggtttagtgcgtgcttatctagcacttgctaaatgcaaa
gatgcattattcactgcacgtgaggcaatgaaggttatgcatcagtctgcaaaagctctc
aagctagttggtgatgttcatgcaatcagttccagtgggagagagaaggcaagaaagttc
tatgaatctgccattcgtcttgaacctggatttctaggagctgcactggccctggctgat
ctgcatgttgcggaaggacgtaacagggaggctgttactctactcgagagatatgtacga
caatgggctgatgattctgtaaacatcaagctggctcaagtttatgcagcaacaaacatg
cttaatgatgcacttttccattatcaatgtgcattaaggataaacccacaaaatgaggct
gcaaagaaaggattggagcgtttggagaaacaaatgaagggagtagacccagatgcacct
gaagaggatgaagataacgaggccgatgacattgacgctgaccaagatgatgctgagctg
ctatag
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