Panicum virgatum (switchgrass): 120697459
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Entry
120697459 CDS
T07260
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120697459
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120697459
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120697459
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
120697459
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class II (U)
120697459
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120697459
Prokaryotic type
120697459
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
DUF2740
Motif
Other DBs
NCBI-GeneID:
120697459
NCBI-ProteinID:
XP_039836636
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All DBs
Position
3K:10061205..10070194
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AA seq
594 aa
AA seq
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MPTVSVGRDRLFAALGRTYTQEEFEALCFEFGIELDDVTTEKAIIRKEKHLEDDGEVEGD
DEVIYKIEVAANRYDLLCLEGLARALRVFTGTEASPVFRVSSIPRGSMLQMHVKPQTSQI
RPHVVCAVLRGVTFNEARYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLVAPFSYEALP
PHGINFVPLKQEESFRADKLMEFYKSDMKLKKFLHIIENSPVYPVIYDSNRTVLSLPPII
NGAHSAITLATRNVFIECTATDLTKAKIVLNTMVTMFSEYCENKFEVEPVEVVHHDGSKT
VYPDLSCYKMEAPLSDILGPIGISLDEKQVVCLLNKMQLQAESHSLKGEHRISVSVPPTR
SDILHARDLVEDVAIAYGYNNVPKSKPKCMTIGGRQPLNRFSDKIRAEVARAGYMEVLTF
TLSSHEENFDMLNRTDDKSKAVIIANPRTSEFEVVRTSLMSCLLKTLKHNIDHPRPIKIF
EVGDVVTLDPSRDVGASNNRRLAALYCNRVSGFEEIMGLVDSIVKIVRAPHVKFGEKYYV
PTDEPEFFPKRQCKIVTSDGKQVGYLGIVHAEVLRKFGIPDPCTFVEMDIEALL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtgagcgtcggccgcgaccggctcttcgccgccctcggccggacctacacg
caggaggagttcgaggcgctctgcttcgagttcggcatcgagctcgacgacgtgacgacg
gagaaggctattatcaggaaggagaaacacctcgaggatgatggcgaggtggagggcgac
gacgaggtcatctacaagatagaggtcgccgccaacagatacgatttgctatgtcttgaa
ggattagcaagagctcttcgtgttttcactgggactgaagcaagccctgtattccgagtt
tcttccatccctcgtggttcaatgcttcagatgcatgttaaaccacagacttcacaaatt
agaccacacgtagtttgtgctgtcctaagaggggttactttcaatgaagcaagatacaac
agcttcatagaccttcaagacaaactccaccaaaatatatgccggaagagaactctggtt
gccattggtacccatgatttggatactctggtagctcccttctcttatgaggctctacca
ccacatggaatcaactttgtcccgttaaagcaggaggaaagcttcagagctgataaactg
atggaattctataaatcagacatgaaactgaagaagtttttgcatataattgagaactct
ccagtgtatccagttatctatgatagcaacagaactgtattatcgttacctcctatcatc
aatggtgcacattcagctatcacccttgcaacaagaaatgtctttattgaatgtacagct
actgaccttaccaaagcaaagattgttctgaatacaatggttaccatgttctctgagtat
tgtgagaataaatttgaagtggaaccagttgaagtggtacatcatgatggcagcaaaact
gtttaccctgatctttcatgttacaaaatggaggctccattatctgacattcttgggcct
atcggcatctccctggatgagaaacaggttgtttgtcttttaaacaaaatgcaactgcaa
gctgaaagtcactcattgaagggcgagcatcggatttcagtatctgttcctccaacaaga
agtgatattctgcatgctcgtgatttggtggaggatgttgctatagcttatggatacaac
aatgtgccaaaatcaaagccaaagtgtatgacaataggaggaaggcaaccattaaaccgg
ttctccgataaaattcgtgccgaggttgcaagagctggctatatggaggttctcacattt
accttgtcttcacatgaagaaaactttgacatgttgaacagaacagatgacaaaagtaaa
gcagttattatcgcaaaccctcgtacttctgaatttgaggttgtaagaactagtctgatg
tcgtgtttattgaaaacactgaaacataatatagaccatccaagacccataaagattttt
gaagttggtgatgtagtgacgttggacccgtcacgcgatgttggtgcatctaataatcgg
cggcttgcagctttgtactgcaatagggtttctggatttgaggaaattatgggattggtg
gatagtatcgtcaaaattgtcagagctccgcatgtcaagtttggcgagaagtactatgtt
cctacagatgaacctgagttcttcccaaaaagacaatgtaaaattgttacaagtgatggc
aagcaggttggctacttaggaattgtccatgctgaggtgctaaggaaattcggcattccg
gatccctgcacatttgtcgagatggacatcgaagccctgttgtag
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