Panicum virgatum (switchgrass): 120697529
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Entry
120697529 CDS
T07260
Name
(RefSeq) PHD finger protein ALFIN-LIKE 1-like isoform X1
KO
K26274
PHD finger protein ALFIN-LIKE
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120697529
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120697529
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GFIT
Motif
Pfam:
Alfin
PHD
PHD_NSD
PHD_4
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
120697529
NCBI-ProteinID:
XP_039836725
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Position
3K:complement(11043667..11047966)
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AA seq
254 aa
AA seq
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MDASYRRAGSGGGSAPRSVEDIFKDYRARRSAIQRALTHDVEEFYAQCDPEKENLCLYGY
ANEAWGVALPAEEVPTELPEPALGINFARDGMNRRDWLALVAVHSDSWLVSVAFYYAARL
NRNERKRLFSMMNELPTVFEVVSGGGKQTRERDRSASDNSGRNKLLLKPLQQTSEPRIEN
DAREPDEGYDEDDGDHSETLCGTCGGIYSADEFWIGCDICEKWYHGKCVKITPAKAESIK
QYKCPSCSKRPRPL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctcctaccgccgcgccggctccgggggcggctctgcgccgcgctccgtcgag
gacatcttcaaggactaccgcgcccgccgctccgccatccagcgcgccctcacccacgac
gtcgaggagttctacgcgcagtgcgatccagagaaggagaacctgtgcctgtacgggtac
gcgaacgaggcgtggggggtggcgctgccggcggaggaggtgcccacggagctgccggag
ccggcgctcgggatcaacttcgcgcgcgacggaatgaaccgccgcgactggctcgcgctc
gtcgccgtccactccgactcgtggctcgtctccgtcgcgttctactacgccgcgcggctc
aaccgcaacgaacggaagcgtttgtttagcatgatgaacgagctgcccactgtttttgaa
gttgtctctggtggcgggaaacagactagggagagggacagatccgcttctgacaacagt
ggtagaaataaactgttattgaagcctctccagcaaacaagcgagccacgcatagaaaat
gacgccagggagcccgacgagggctacgacgaagacgacggcgaccacagcgaaacgctg
tgtgggacttgcggcgggatatacagcgcagacgagttctggatcgggtgcgacatttgc
gagaagtggtaccacggcaagtgcgtgaagatcaccccagcaaaggcagagagcataaag
cagtacaagtgcccgagctgctcaaagagacctaggccactgtag
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