Panicum virgatum (switchgrass): 120697631
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Entry
120697631 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein BIP1-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120697631
04141 Protein processing in endoplasmic reticulum
120697631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120697631
04131 Membrane trafficking [BR:
pvir04131
]
120697631
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120697631
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
120697631
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120697631
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120697631
Autophagy
ER-phagy
ER stress-related proteins
120697631
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120697631
Exosomal proteins of other body fluids (saliva and urine)
120697631
Exosomal proteins of colorectal cancer cells
120697631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FGGY_C
FtsA
DDR
Radial_spoke_3
ParM_N
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
120697631
NCBI-ProteinID:
XP_039836884
LinkDB
All DBs
Position
1K:complement(1231983..1235999)
Genome browser
AA seq
665 aa
AA seq
DB search
MDRVRGSAFLLAVLLAGSLFAFSVAKEETKKLGTVIGIDLGTTYSCVGVYKNGHVEIIAN
DQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVP
YKIVNKDGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAYF
NDAQRQATKDAGVISGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILT
IDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKYSKDISKDNRALGKLRREAERAK
RALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQI
HEIVLVGGSTRIPKVQQLLRDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGDETKDI
LLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTK
DCRLLGKFDLSGIPRAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLS
QEEIDRMVREAEEFAEEDKKVKEKIDARNQLETYVYNMKNTIGDKDKLADKLESEEKEKV
EEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIISAVYQRSGGAPGGGADGEGGVDD
DHDEL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggttcgcggatccgcgttcctgctcgccgtcctgctcgcaggatccctgttt
gcattctcagttgcaaaggaggagaccaagaagctcggaactgtgattggtattgatctc
ggtaccacctactcctgtgtcggtgtctacaagaacggtcatgtcgagatcatcgccaat
gaccagggtaaccgtatcacaccctcatgggttgccttcaccgatagtgagaggctcatc
ggtgaggctgccaagaaccaggcagctgtcaaccctgaaaggaccatcttcgacgtcaag
cgtctgatcggaagaaagtttgaggacaaggaagtccagagggacatgaaacttgttccc
tacaagattgttaacaaggatggtaagccctacattcaggtcaagatcaaggatggagag
aacaaggtcttcagccctgaggagatcagtgccatgattcttggcaagatgaaggatact
gctgaggcataccttggcaagaagatcaatgatgctgttgtcactgtccctgcgtacttc
aacgatgcgcagaggcaggcaaccaaggatgctggtgtcatttccggcctcaatgttgct
aggatcatcaatgagccaactgctgctgctattgcctatggtttggacaagaagggtggc
gagaagaacatccttgtcttcgaccttggtggtggtactttcgatgtcagcatcttgacc
attgacaatggtgtgtttgaggtgcttgccaccaacggtgacacccatcttggaggtgag
gactttgaccagaggatcatggagtacttcatcaagttgatcaagaagaagtacagcaag
gacatcagcaaggacaaccgtgctcttggaaagctgaggagggaagctgagcgtgccaag
agagccctcagcaaccagcaccaggtccgtgttgagattgagtccctcttcgacgggacc
gatttctcggagccgctgacccgtgccaggttcgaggagctgaacaacgatctgttccgc
aagaccatgggccctgtcaagaaggccatggaggatgctggccttgagaagagccagatc
cacgagattgtccttgttggtggaagcaccaggattcccaaggtccagcagctcctcagg
gactactttgatggcaaggagccgaacaagggtgtaaaccctgatgaagctgttgcttat
ggtgctgcggtgcagggaagcatcttgagcggcgagggtggtgacgagaccaaagatatc
cttctccttgacgttgctcccctgacccttggtattgagactgttggaggagtcatgacc
aagttgatccccaggaacacagtcatccccaccaagaagtcacaggtgttcaccacctac
caggaccagcagaccactgtctccatccaggtctttgagggtgagcgcagcatgaccaag
gactgccgccttcttggcaagttcgatctctctggcattccacgagctcccaggggcact
ccccagattgaggtgaccttcgaggttgatgccaacggtatcctgaacgtgaaggctgag
gacaagggcactggcaagtcagagaagatcacgatcaccaacgagaagggccgcctgagc
caggaggagattgaccgcatggtccgggaggcggaggagtttgccgaggaggacaagaag
gtgaaggagaagatcgacgcccggaaccagcttgagacgtatgtgtacaacatgaagaac
acaatcggcgacaaggacaagctggctgacaagctggagagcgaggagaaggagaaggtg
gaggaggccctcaaggaggccctggagtggctggacgataaccagtcggccgagaaggag
gactacgaggagaagctcaaggaggtggaggccgtgtgcaaccccatcatctcggccgtg
taccagaggtccggcggtgccccgggtggtggtgctgacggcgagggcggtgttgatgac
gaccatgatgagctgtag
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