Panicum virgatum (switchgrass): 120697718
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Entry
120697718 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120697718
KO
K17925
sorting nexin-13
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120697718
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120697718
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
120697718
NCBI-ProteinID:
XP_039836952
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All DBs
Position
3K:complement(14135105..14142826)
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AA seq
1132 aa
AA seq
DB search
MATAAGAAGAPRAQTLRDLAEEGKKRAVLLLVFAFGLAFLMSLTSSSVWFNLPFATALII
LFRYISLDYDLRRKSTASTDQDISRPLVKMKSTELKKVLLTEKDGKSDWRSKVNSPPVEA
AFEQFSRHLVTEWVTDLWYSRVTPDKEGPEELIAVVNTVLGEISVRARNVDLISLLTRDL
VDLICNSLERYHFCQAKIGKEKFVNLPSERRDAELKMTLIAENKLHPALFSANAEYKVLQ
SLADGLISITVKPQDLQCTFFRCTARELLACAVLRPVMNLANPRFINERIESLALSRANK
LEKGVEESMEDATTVKQRELSMPSIDELSALIDHSSPGVELVPFHQGQSNTASDIQPSRS
KNPSNLKLESSNASLVGSLHPLESTSLPSTSHIASGNGFSLHSRSSDRASPNSRGREHAQ
PLGISSQRTHQALAPEHLENMWTKGKNYKFENAKHNAKAPIGSDSLRLSSSGQQPIPCST
SISQRQALLSQSEDQRLIRQSTAPTYSNGTNHMPKSLSAEIAEHAGQEDFGVESESSYAT
EDDELTNVTGLDSPVTRVWESKSKGNATSSHIHHPLESSGFHRAKKNRSHVGKLKMSRTS
SGRKRSRSNAQKPPIWQEVDRSSFSVGDDLDILNASANDSKTDELVEDTESENMARMFSS
ANSSTFSLASTDSSYSSNYGGANVLQDSYLKLSCEVVGASIVKSGSGMFAVYSISVTDAN
GNSWSIKRRFRHFEELHRRLKEYFQYNLHLPPKHFLSSGLEVPVVRERCKLLDIYLKSLL
QIPIVSSCIEVWDFLSVDSQTYIFTDSLSVIQTLSVSLDERSTGKNRKALNAPGVLNGNL
ISGGQSFHGHKDNTARKDLDFAVGDGLRSRKGIVEKNLANSAGNMTNSVCDTTSGSDPEQ
NDYSFSIDSVNPKKLRPSETNDTSQMLESDGFSVSPNDWVAPNLSVPLFHLVDVVFQLQD
GGWIRRQAFWVAKQLLQLGMGDTFDDWLVDKIQLLRKGRIIAFTVKRIEQILWPDGIFMT
KHPKRKTSPPPPGTRNNGMGNNLSDQQRLEAAHRANFVRELIIDKAPSPLVSLVGRKDYD
KCAQDIYFFLQSPICLKQLALELLELLVLAAFPELDDTVRKWHEDKQQFRAL
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggccggggccgcgggcgcgccgagggcgcagacgctgcgggacctcgcg
gaggaggggaagaagcgggccgtcctgctcctcgtcttcgccttcgggctcgcgttcctc
atgtccctgacgagctcgtcagtatggtttaacctgccatttgccacagctctgattatt
ttatttcgctacatatcacttgactatgacctccgtagaaagagcacagctagcacagat
caggacatcagtcgtccacttgtaaaaatgaagagcactgagttaaagaaagtccttctg
actgaaaaggatggaaaatctgattggaggagcaaggttaattcacctccagttgaagca
gcatttgaacagttctcaaggcaccttgtcacagaatgggtaacagatctgtggtactcc
cgtgtaacacctgacaaggaaggtccagaggaactcatcgccgtagttaatactgtcctg
ggggagatttcagtccgggcaagaaatgttgaccttatcagtctgctaaccagagatttg
gttgatcttatttgcaatagtttggaacgctatcatttctgtcaagccaagattggaaaa
gagaagtttgtgaacctaccatcagagcgtcgtgatgctgaactgaaaatgacccttata
gctgaaaacaagttgcatcctgctttattttcagccaatgccgaatacaaggtattacaa
agtcttgctgatgggttgatctcaatcacagtgaagcctcaagatctacagtgtactttc
ttccggtgcacagcgcgagaacttcttgcttgtgcagtcttgagacctgtcatgaactta
gcaaatccaaggtttataaatgaaagaattgaatcgttggctctttcacgtgccaacaag
ttggagaaaggagttgaagaatcaatggaggatgctacaactgttaagcaaagggaactt
tctatgccctctatagatgaactttctgcactaatagatcactcgagtcctggtgttgaa
ctcgttccatttcatcagggtcagtccaatacagcatcagatattcaacccagcagaagt
aaaaatccatctaatctaaaactagaatcctctaatgcttctttggttggtagtttgcat
ccgcttgagtcgacaagtttaccttccacttcccacattgcttcgggtaatggtttttct
ttacattccagaagcagtgacagagcatctcccaatagtcgtgggagagagcatgcacaa
cccttgggtattagctcccagcgaacacatcaagctctagcacctgagcaccttgagaat
atgtggacaaagggaaagaattacaaattcgaaaatgcaaaacataatgcaaaagcacct
attggatccgattcactacgcttgagttcttcaggacagcagccgattccatgcagcact
tcgatttctcaaaggcaagcacttttatctcaatccgaggaccagcgcttgataagacaa
tcaactgcacctacatattcaaatggcaccaaccacatgccgaaaagcctatctgcagaa
attgcagaacatgctggacaagaagactttggagtagagagtgagagttcgtatgccact
gaggatgatgaactcaccaatgtgactggacttgattctcctgttacccgagtatgggaa
agcaaaagtaaaggaaatgccacctcatcacatatacatcacccacttgagtcttctggt
ttccatagagcaaagaagaatagaagtcatgtgggaaaactgaaaatgtcgagaacttct
tcaggaagaaaaaggtcgaggtcaaatgctcaaaagcctcccatctggcaagaagtagat
agatcctctttctcggttggggatgatttggacatactaaatgcatctgcaaatgattca
aagacagatgaattagttgaggatactgagtcagaaaatatggctagaatgtttagtagt
gcaaattcttcaactttttccttggcatcaactgactcttcttattcttcaaattatggt
ggtgccaatgtgctacaagattcttatctgaagttaagttgcgaggtggtaggagctagc
attgtgaaaagtgggtctggcatgtttgctgtgtattctatttctgtgactgatgccaat
gggaatagttggtccatcaagaggaggtttcgtcatttcgaagagctgcatcgacgtttg
aaagagtatttccagtacaatcttcatttgcctccaaaacactttctctcatcaggttta
gaggttcctgttgttcgagagagatgcaagctgcttgacatatatctgaagagccttctt
caaattccgattgtttcaagctgcatagaagtctgggattttctcagtgtggactcacag
acttatattttcacagactcgctctcagttatccagacgttgtcagttagtttagatgaa
agatcaactgggaagaatagaaaagcattgaatgctcctggagttttgaatggaaatctt
atttctggaggtcaatccttccatggacataaagacaatactgcgcgtaaggatttggac
ttcgctgtcggtgatggtttgagatctaggaaagggattgtggaaaagaatttagcaaat
agtgctggcaatatgacaaatagtgtttgtgacacaacttctggaagtgacccggagcag
aacgattattcgttttcaattgattcagtaaatcctaagaagctgcgtccaagcgaaacc
aatgacacatctcaaatgttggagtctgatggattctctgtatctcctaatgattgggtg
gcaccaaatcttagtgtccccttgtttcatcttgttgatgtggttttccagctccaagat
ggaggttggatcaggcgtcaagcattttgggtagcgaagcaactactgcaattgggaatg
ggagacacctttgatgactggcttgttgacaaaatccagttactaaggaaaggaaggata
attgctttcactgttaagcgtattgaacaaattctctggcctgatgggattttcatgaca
aaacatccaaagagaaaaacatcaccaccacctcctggcactcggaacaatggcatgggc
aacaatctaagtgatcaacaacggctagaagctgctcatcgtgcaaattttgtccgtgaa
ttaataatagacaaagcaccatctccactagtaagtctggttggtcgaaaggattatgac
aaatgtgctcaggatatctacttctttcttcagtccccaatttgtttgaagcagctagca
ctcgagctcctggagctgcttgttcttgctgcatttccagagttggatgacactgtgagg
aagtggcatgaagataaacagcagttccgtgccctgtga
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