KEGG   Panicum virgatum (switchgrass): 120697761
Entry
120697761         CDS       T07260                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 39-like isoform X1
  KO
K18753  butyrate response factor
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120697761
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120697761
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_4 zf-CCCH_2 Scaffolding_pro
Other DBs
NCBI-GeneID: 120697761
NCBI-ProteinID: XP_039837015
LinkDB
Position
3K:complement(14781009..14783251)
AA seq 328 aa
MEVVLAPDQPDGLHAAFGPKEPCGFGDRRFSTPSLLNGGDLFYGYPSPSSPFGLGRVLSS
PSPRAASLSRGSSDSGSVVDEGNDAAAAAAAAAERRQRLARLALQYQEVVTCFEVCLSYL
ADTSNEAATLRRENDELRIANEDLARRIKMVGGRLVDEFSGLSLTEEHPIPLLPLTPLPA
PPAIPKSISVRSPVYLKMNQNGKHRPSKPTKLGSPQRVSVGMESGVNGEGELKGGEEQQP
NSGLEFEVYNQGMLKTELCNKWEETGACPYGDQCQFAHGIAELRPVIRHPRYKTEVCRMV
LAGVVCPYGHRCHFRHSINPTDLFPLHP
NT seq 987 nt   +upstreamnt  +downstreamnt
atggaagtagtccttgctccggaccagcccgacggcctgcacgcggcgttcgggcccaag
gagccctgcggcttcggagatcgacgcttctccacgcccagccttctcaacggcggcgat
ctcttctacggctacccctccccctcgtcccccttcggcctcggccgcgtgctctcctcg
ccgtcgccgcgcgccgcctcgctctcccgcggctcctccgactccggctccgtcgtcgat
gaagggaacgatgcggccgccgccgccgccgccgccgcagagcgccgccaacgcctcgcc
cgcctcgcgctccagtaccaggaggtggtcacctgcttcgaggtctgcctctcgtacctc
gccgacaccagcaacgaggcagcgacgctccgccgggagaacgacgagctccgcatcgcc
aacgaggatctcgcccgccgcatcaagatggtcggcggcaggctcgtcgacgagttcagc
ggtctgagcctcaccgaggagcaccccatcccacttcttcctctaacaccgctgccagcc
ccaccggcgataccgaagagcatctccgtccggtcgcccgtttacctcaagatgaaccag
aatggcaagcatcgcccctccaagccaacgaagctgggctcgccgcagcgcgtgtccgta
ggcatggaaagtggcgtcaatggggagggggagctcaagggtggggaggagcagcagccc
aacagcgggctggagttcgaggtgtacaatcagggcatgttgaagacggagctgtgcaac
aagtgggaggagaccggcgcgtgcccgtacggcgaccagtgccagtttgcgcacggcatc
gccgagctccgccccgtgatccgccacccgcgctacaagaccgaggtctgccgcatggtg
ctcgcgggcgtcgtctgcccctacggccaccgctgccacttccgccactccatcaacccc
accgacctcttccccctgcacccctga

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