KEGG   Panicum virgatum (switchgrass): 120697794
Entry
120697794         CDS       T07260                                 
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1-like
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    120697794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120697794
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    120697794
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C EIF3I Pkinase Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_NUP159_NUP214 WD40_like PK_Tyr_Ser-Thr WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 120697794
NCBI-ProteinID: XP_039837065
LinkDB
Position
3K:15083645..15091875
AA seq 1120 aa
MEGTTAAEVGGAADGAAGDVQIKGSKENGQPAEQQQQPSGSEALEMPATPLPRDIDWSEH
FSFFTSLGGFGGSSDGARGLTSVGLSNSESRPDSVTQRGLDHDAERVEELTLENCINIDV
QPEISAGGSSSSGDRHTVIKGLWGNFTRVAWRTSELASRENAAVSYGDIANLRAADASSR
ENLGTDLANNMISRNNDVSGREIPLSRGGNVNNEFVMPFRNQQLLLSARPNQDEHRAERD
NVIRVSSFSNRILGQMRSKTLTPPSGVVVSPLNGKSKGKGVAYQGAREEKQVHATARPRD
PLDKIPTIPTSMYDSMTRVDPLPFNTGANVSKSHCDGTSLRELIKPGRQTLSKFEKMHLF
KQILDLVDKCHAQGYTLQHLRPSYFTIPPSNQVKYIGSYTTQDLPTSIRQDVPREDLGNR
KRSFGHKIEHQESDGHGNSMLKYQKVGEQGSVAVRRPTQTFWTDQRVNNQNEDVNFSCTV
RERSKFVEPYGSYTSCAQHFSNSGNQQPAFELRNLEESWYISPEELSQFKGTFPSNIYSL
GVLLFELFCCSETWEVHCAVMSNLRQRILPPNFLSESPKEAGFCLWLLHPDPCSRPKARD
ILGCDLINEGRDLSLLDQAPVSISEDDTESSLLLNFLSQLKEEKEMQAAKLSADLGSLQT
DIAEVERRHSARMGFSLEDTDVPATSSALSGASGSAPQGALLSGLQPSLCKSSIYEERVM
RNLEQLENAYYSMRSTVDACETNAIKRPDNEALRVRENFHQIHSDSDATDEQTDRLGCFF
DGLCKYARHSRFEVRGILKNADILNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALL
NDHVDIHYPLIEMPSKSKLSCVCWNNYIKNYLASTDYDGTVQLWDAGSGQGFTQFTEHRK
RAWSVSFSEVDPTKLASGSDDCCVKVWSINQKNCIDTIRNVANVCCVQFSPYSSHMLAFG
SADYKIYCYDLRNTRIPWCTISGHGKAVSYVRFLDPETLISASTDNTLKIWDLNRTNCNG
LSTDSCSLTLNGHTNEKNFVGLSVHDGYITCGSETNEVFSYYKTFPMPITSHKFGSIDPI
TGQVTNEDNQQFVSSVCWRGKSNMVVAANSSGSIKVLELV
NT seq 3363 nt   +upstreamnt  +downstreamnt
atggaagggacgacggcggctgaggtgggcggcgccgccgacggcgcggccggggatgtg
cagattaaggggagcaaggagaatgggcagcccgcggagcagcagcagcagccgtcgggc
agcgaggcgctggagatgcctgccacgccgctcccgcgggacatcgactggtcggagcat
ttctcctttttcacctcgttgggcgggtttggaggcagctcggacggcgcgaggggcctg
accagcgttggcctctccaattccgagtcgaggccagacagcgtgacacagcgtggtttg
gaccatgacgcggagagggtggaggagctcacattggagaattgcatcaacatcgatgtt
caacccgagatttcagctggtggaagctcaagcagtggggataggcatactgtcattaag
ggcctgtggggtaactttacacgggtggcatggagaactagcgagttggccagcagggag
aacgcagcagtgagttatggtgacattgcaaacctgagggctgctgatgcttctagcagg
gaaaatttggggacggaccttgccaacaatatgatctcacggaataacgacgtctccggc
agggagatacccctgagtcgaggtggcaatgtgaataatgagtttgtgatgccatttcgc
aatcagcagcttttattatctgcaaggccgaatcaggatgaacatcgggctgaaagggac
aatgttattagagtaagcagcttctccaatagaattctcgggcagatgaggagtaagacc
ttaacacctccatctggggttgtagtatcaccgcttaatggcaaatcaaaaggtaaaggg
gttgcttaccaaggtgcacgagaggagaagcaagtgcacgctactgcaagacctagagac
cctttggacaagattccgactattcctacctcaatgtatgattctatgaccagagtggat
ccgttgcctttcaatactggtgcaaatgtttcaaaatctcactgtgatggaactagcctg
agggaactgattaagcctggccggcaaacattgagcaaatttgagaaaatgcatttgttt
aagcagatccttgatcttgtggataagtgtcatgcacagggttatactttgcaacatttg
cgaccatcatattttacaattccaccttcaaaccaagttaagtatattggttcttatact
acacaagatttgccaacatcaatcagacaagacgtccctagagaagatcttgggaataga
aaaaggagttttggccataaaattgagcaccaagagtctgatggacatggaaactcaatg
ctgaagtatcaaaaggttggtgagcaaggctcagttgctgtcaggcgaccaacacagacc
ttttggactgaccaaagagtcaacaatcaaaatgaagatgtcaattttagttgcactgtc
agagaacgttctaagtttgtcgaaccatatggcagttatacatcttgtgctcaacatttt
tctaattctggcaaccaacaaccggcatttgaattgaggaatctagaagaaagctggtac
ataagcccggaagagctcagtcaatttaaaggcacattcccatcaaacatctacagcctt
ggggttcttctatttgagctcttttgctgttctgagacatgggaggtgcactgtgctgta
atgtcaaatctccgccaacgcatcctgcctccaaattttctttcagaaagtcctaaggag
gctggcttttgcctttggttactgcacccagatccttgttcgagaccaaaagcaagagat
attcttggatgtgacttgataaatgagggtcgggatttgtccttgttagatcaggcgcca
gtttccataagtgaagatgacactgaatctagtttgctacttaatttcctttctcaattg
aaagaagaaaaggagatgcaggctgctaagttatcagcagatcttggaagcttacaaaca
gatatcgcagaggttgagagaagacactcagcaagaatgggatttagtttagaggacaca
gatgtaccggcaacttctagtgctttgtcaggagcttctgggagtgcccctcaaggtgcg
ttgctgtcaggtttgcaaccatcattgtgtaagtcaagcatatatgaggagagggtgatg
aggaatttggagcagcttgaaaatgcatattactccatgagatctactgtggacgcctgt
gaaactaatgcaatcaaacgtccagataatgaggctttgagggtccgtgaaaatttccat
caaattcacagtgattctgatgcgacggatgagcaaacggaccgccttggatgctttttt
gatggtttatgcaaatatgctcgtcacagtaggtttgaggtacgaggaattttgaagaat
gcagatatacttaactctccgaatgtcatctgttcattgagtttcgatagggatgaagaa
tattttgctgctgctggagtttcaaagaaaataaaaatatttgaattcgatgcactccta
aatgaccatgttgatattcattacccgttgatagagatgcctagcaagtccaagcttagt
tgtgtctgttggaacaactatataaagaactacctggcatcaacagactatgatggcact
gttcagttatgggatgccggctctggtcaaggattcacacagtttacagagcatcggaaa
agagcctggtctgtgagtttttcagaagtggaccctactaagttggcaagtggtagtgac
gattgttgcgtgaaagtatggagtattaaccagaaaaattgcattgatacaatcagaaat
gtggccaatgtatgctgtgttcaattctctccatactcctcccacatgctagcttttggt
tcagctgattacaagatatactgttatgatctgaggaacacaaggatcccttggtgtact
atttcgggacatgggaaagctgttagttatgtaaggttcttggatccagaaacacttatc
tctgcatcaacggacaacacattgaagatatgggatcttaaccggactaattgcaatgga
ttgtctacagattcttgtagcctgacactgaatggtcataccaatgagaagaattttgta
gggttatctgttcatgatggatacataacatgtggctccgaaaccaatgaagtattttct
tactacaaaaccttccctatgccaataacttctcataagtttggttctattgacccgata
actggacaagtgacaaatgaagacaaccagcaatttgtatccagtgtttgctggagaggg
aagtcaaacatggtagtggctgctaactctagtggcagcatcaaagtgcttgagcttgtg
tga

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