Panicum virgatum (switchgrass): 120697904
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Entry
120697904 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 14-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120697904
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120697904
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120697904
NCBI-ProteinID:
XP_039837219
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Position
3K:complement(16354581..16358246)
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AA seq
499 aa
AA seq
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MEDRAPLLLPQYTLRDGGDGREEKCGGGVRWWRDLAREAGKVGYVALPMAAVSVSQYAVQ
VASNMMVGHLPGVLPLSASAIATSLASVSGFSLLIGMASGLETLCGQAYGAKQYDKLGMH
TYRAIVTLIVVSIPISLLWVFIAKLLILIGQDPLISKEAGRYIVWLIPGLFAYAISQPLT
KFLQSQSLIIPMLWSSIATLLLHIPICWLLVFKTSLGYIGASLAISLSYWLNVIMLAAYI
RCSNSCKETRLPPTVEAFKGVGVFLRLALPSALMLCFEWWSFEILILLSGILPNPELQTS
VLSICLTTITLIYTIPYGLGAAASTRVANELGGGNPEGARSAVRVVMCIAVMEAAIITVI
LLASQHILGYAYSSDKEVVAYVNAMVPFVCISVAADSLQGVLSGIARGCGWQHLGAYVNL
GSFYLVGIPMAVLLGFVLKMEGKGLWIGISCGSIVQFLLLATVAFFSNWQKMSDKARERV
FSDELSDKVPSESDGSEMP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagagcaccgcttctgctgccgcagtacacgttgcgggacggcggcgacgga
cgggaggagaagtgcggcggcggcgtgaggtggtggagggacctggcgcgggaggccggc
aaggtcgggtacgtggccctgccgatggcggccgtgagcgtgtcgcagtacgcggtgcag
gtggcgtccaacatgatggtcggtcacctccccggcgtcctcccgctctccgcctccgcc
atcgccacctcccttgccagcgtttccggtttcagcctccttattggaatggcaagtgga
ttggaaactttatgcggccaagcctatggtgcaaaacagtacgacaaattgggaatgcac
acctatagagctatagtcacactcatagttgtgagcattccaatatcacttctgtgggtt
ttcatagccaaactcctcatcctcataggtcaagatcccttgatctcaaaggaagctggg
agatatatagtctggttgattccaggactctttgcatacgcaatcagccagcctctcaca
aaatttctgcagtctcagagtctgataattcctatgctttggtcctccattgcaacactg
ctcctgcacattcctatttgctggttattggtgttcaagaccagtttggggtatattgga
gcttctttggcgataagcttatcatattggttaaacgtaattatgcttgctgcttacatc
agatgttcgaattcttgtaaggagacccgtttgcctcctacagttgaggccttcaaagga
gttggtgtgtttctgcgcctagctctgccatctgcactgatgctgtgttttgaatggtgg
tcctttgagatcctcattcttctctcaggaattttaccaaatccagaactgcaaacttca
gttctttcaatctgcctgacgactatcacgttaatctatactataccttatgggcttgga
gcggctgcaagcactagggtagcaaatgaattaggtggtggtaaccccgaaggagctaga
tcagctgtccgggttgtcatgtgtattgccgtgatggaggcggctatcatcacagtaata
ttgttggcatcacagcacatcttgggctatgcatatagcagcgataaggaggttgttgcg
tatgtcaatgcaatggttccatttgtgtgcatctctgttgctgctgatagcctgcaagga
gttctatcaggtattgctagaggatgcgggtggcagcacttgggcgcctatgtcaacctg
ggctcattctatctcgttgggatcccaatggcagtcttgctcggctttgttctaaagatg
gaaggaaaagggctttggataggcatttcctgcggctccattgtgcagttcttactcctt
gccaccgtagcattcttcagcaactggcagaagatgtccgataaagcgagggagagagtt
ttcagcgacgagctgtcagacaaggtaccttcggaatcggatggatcggaaatgccttaa
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