Panicum virgatum (switchgrass): 120697908
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Entry
120697908 CDS
T07260
Name
(RefSeq) transcription factor RAX2-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120697908
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120697908
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120697908
NCBI-ProteinID:
XP_039837222
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Position
3K:complement(16392331..16394273)
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AA seq
273 aa
AA seq
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MGRAPCCDKARVKRGPWSPEEDEQLRSYVRRHGIGGNWIALPQKAGLNRCGKSCRLRWLN
YLRPDIKHGGYTEQEDQLILSLYSSIGSRWSIIASKLPGRTDNDVKNYWNTKLKKKAAAA
AVVGATGGAFAAPATPPALSPASSSVTSSSGDARFAAYPPQPQAQQHQGLIRFDAPRSTE
LAPVPPVAQLGGAAWASSSAAAGGAVAALDDDVFLPDLVGGGAVEQLFPYGDFYAGLQDR
ALELSACYFPNMAEMWGAAASDAKPQGLCNTLT
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgcgccgtgctgcgacaaggcgcgcgtcaagcgggggccctggtcgccggag
gaggacgagcagctgcggagctacgtccgccgccacggcatcggcggcaactggatcgcc
ctgccgcagaaagcagggctgaaccggtgcggcaagagctgccggctgcggtggctcaac
tacctgcggccggacatcaagcacggcggctacacggaacaggaggaccagctcatcctg
tcgctctacagctcgatcgggagcaggtggtcgatcatcgcgtccaagctgcctggccgg
accgacaacgacgtcaagaactactggaacaccaagctcaagaagaaggctgcggcggcg
gccgtggtgggcgccaccggcggagccttcgccgcgcccgccacgccgccggcgctctcg
cccgcctcctcgtccgtgaccagctcgagcggcgacgcgcgcttcgccgcgtacccgccg
cagccacaggcgcagcagcaccaggggctgatccgcttcgacgcgccgcggagcaccgag
ctcgcgcccgtgccgcccgtcgcgcagctgggcggcgccgcctgggcgtcgtcgtccgcg
gcagcgggcggcgccgtggcggcgctggacgacgacgtgttcctgcccgatctcgtcggc
ggaggcgccgtcgagcagctgttcccgtacggcgacttctacgctgggctgcaggaccgg
gccctggagctctcggcgtgctacttccccaacatggccgagatgtggggcgccgctgcc
tccgacgccaagccgcagggcctctgcaacaccttgacatag
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