Panicum virgatum (switchgrass): 120697994
Help
Entry
120697994 CDS
T07260
Name
(RefSeq) myosin-9-like isoform X1
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120697994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120697994
04131 Membrane trafficking [BR:
pvir04131
]
120697994
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120697994
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120697994
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120697994
mRNA cycle factors
P-body specific factors
120697994
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120697994
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120697994
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120697994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
S1
Translat_reg
IQ
AAA_16
Motif
Other DBs
NCBI-GeneID:
120697994
NCBI-ProteinID:
XP_039837339
LinkDB
All DBs
Position
3K:complement(17513579..17539465)
Genome browser
AA seq
2157 aa
AA seq
DB search
MASTLKIVVGSHIWMEDKDLAWIDGEVFRIEDRNVHVHATNGKTVIVSISDIHTKDTEVP
SNGIDDMTRLSYLHEPGVLNNLAIRYAKNIIYTYTGNILIAINPFQRLPHLSDPYTMEKY
KGANFGELDPHVFAIADVSYRQMMNEGKSNSILVSGESGAGKTETTKMLMTYLAFLGGRS
RTGGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGKISGAAIRTYLLE
RSRVCQINSPERNYHCFYFLCAAPLEDIKRYKLADPSSFHYLNQSTCIKLDEISDAKEYL
ATRSAMNTVGITEQEQEATFRVVAAVLHLGNISFVKGREVDSSLLKDEKARFHLNAAAEL
LMCDCGNLENALIKRKINTPEGVITTTVDPNSATVSRDGLAKQIYSRLFDWLVNRLNASI
GQDTSSDRLIGVLDIYGFESFKTNSFEQLCINFTNEKLQQHFNQNVFKMEQEEYNREQID
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKCTHESFSQKLYEKFKNNKRFSKPKL
SRTAFTIQHYAGEVTYQSDHFLDKNRDYVVVEHQELLNASRCSFVSGLFPSVLEENTKAS
KTSIATRFKWQLQELMETLNSTEPHYIRCIKPNNILKPTAFENINVLQQLRCSGVLEAIR
ISCAGYPTRKIFHDFLYQLRILAPEVFMEKNNEKVLCQKILDKMELHGYQIGRTKVFLRA
GQMAELDARRTEVRNKAARAVQSRFRTHAAREKFLVLRKTSISFQSFVRVILAFKLRVLL
RKQAAALQIQKSYRCYVAWNSYSKLRSSAITLQTGLRLFGVYKEYNIRKQNKASIHIQAW
WRCHRDYSNYCKIKRSVLIYQCAWRRRVARGELRKLKMAARDTEALKVEKEKLEEHVEEL
TSCLGLEKKLRTDLEKNKAGEISKLQAALREMERRVEEATEMQERELAKRAIEEALAQER
EKITSLTNEVEELKVLLLREQEENSATKSALVIAQEENDALKRKIVVADENVEQLRDTVK
RFEKNATELESSLMMEKEQNVTTRRELTEAHQRVDELLMEIADANGKSTELLTTVQRLQK
SLIEGEATLLTERQESEATKKSLSEAHAEIEELLNKIKVAEQDISNFQDNTQRLEVTATT
LETSLLAEKQKSTAIFSQLAEAQQDIEVLQKKFADANRTNDLLQDSLKRCEENATTRDGL
YVAERKEHDETKQALSKAQERNWELLRKVDDSEKTINKMLENAQRLEKHATARESLLLKT
KQNLDCTTKALTEARGRNRDLMISFEDSAKKINMLEDSVSRLEECIAEKDSLLEVERQEH
QTTNEDVANAQKKINELIHESQQFEETRKQLEDTIKRIEADATARDALLLSEKQEHETTK
KVLIETQWRNEELIKKIQDYDKNNLQLQLTVERLQENASATEVLMLREREQNNATMKAQA
ESQERNLQFLKKLEDVDKKIGLLQGSVQRLGDNTAKDALLLSERREKDALKKALTESEYK
NEELLMKTDEANKKVEHLQNTINSLKEDMAASLEAERQENETIRRSLVEAQERNDVLFKK
VRDSEYRAHQLQDTVQKLQVDAISRLSNFAMEKQEGDVVKNVHIEAHGRNENLIRRNEDL
LKRNDDLVKKIEDSTILVTQLRENLERLEGKAANLESENQALRQQAITTPPSTAKSQAAC
SKINEFQQRCPENGHILNGNAAYAEMKSSLGPTETRASMGSSPDLISHKDYENGQRLLNE
VYQPFQHQQPLNHQQLLLKYITQYLGFSGSKPIAAPLIYYCLLHWRSFEEAKTGVFDSII
QVVNSATEARHDTRGLAYWLSNLSTLSVLLQRSFKVSRTTVSTPHRRRFSCERIFQANQT
SNSGLAYFSAQIDGAIGFHQIEAKYPALLFKQQLVDQIEKVYGMISDRMKKELNPLLELC
IQDPRTSYSTQAKASLSPASGFGQQEQLMHWLSIVKIFNNYLHVLRANHVPTILVQKLLT
QIFSMVNVQLFNRLLLRRECCSYSNGQYIKDGLTQLKHWCNDVSREFADSAWAALRHIRQ
AVDFVVISLKPIRTWDEIRNDICPDLSLQQLERIVGMYWDDVNGTNVTSAEFISSMRATM
REESNSVSSFSVLLDDDSSIPFSLEDIAKSMPNIEDTSVNDLLPFIRENQSFTFILQ
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacattaaaaattgttgtaggctcccatatatggatggaggataaagatcta
gcttggatcgatggtgaggttttcagaattgaagatcgaaacgtccatgtccatgctact
aatggaaagacggttattgtgagcatatcagacattcatacaaaggacacggaagtgcca
tctaatggcattgatgacatgacacgtctatcatacttgcatgaacctggtgttctaaat
aatcttgctattcgatatgcaaaaaatataatctatacctatactggcaatattctgatt
gcaattaatccattccaaaggctgcctcatctttctgatccctatactatggagaagtac
aaaggtgctaattttggtgagctagaccctcatgtatttgcaattgccgatgtttcttac
aggcaaatgatgaatgagggaaagagcaactccattttggtgagcggtgaaagtggtgct
ggtaaaactgaaaccacaaagatgcttatgacatatcttgcttttttgggtggacgatcg
agaacaggagggaggacagttgaacaacaagttttagaatctaatcccgtcctcgaagcc
tttggcaatgcaaagactgttcgtaataacaactcaagtcgatttggcaaatttgttgaa
atccaatttgacaagagtgggaagatatcaggcgctgccattagaacatacttgcttgaa
agatctcgtgtttgccaaatcaatagtccagagagaaactatcattgcttttacttccta
tgtgcagcaccattagaggatatcaaaaggtataagctggctgacccgtcatcgtttcac
tatctcaaccaatccacgtgcattaaacttgatgaaattagtgatgctaaggagtatctc
gcaacacgcagtgcgatgaatacggttggcatcactgaacaggagcaggaggctacattc
agagtagttgctgctgttctccacctcgggaatatcagttttgtgaaagggagagaggta
gattcatctttactaaaggatgagaaagctaggtttcatcttaatgcagcagcagagctc
ttgatgtgcgattgcgggaatctggagaacgcattgataaagagaaaaataaatacacct
gaaggagttataaccacaacagttgatcctaattccgctactgttagtagggatggctta
gcaaagcaaatatattctcgactatttgactggcttgtaaacagactaaatgcatccata
ggacaagatacatcctctgaccgattgattggagtacttgatatctatggttttgaaagt
tttaagactaatagctttgaacaattgtgcatcaatttcaccaatgaaaaactccaacaa
cattttaatcagaatgtttttaaaatggagcaggaagagtacaacagagagcagattgac
tggagttacatagaatttgtcgacaaccaagatgttctggacttgattgagaagaaacct
ggtggaattattgcacttcttgatgaagcttgtatgtttcctaaatgcacgcatgaatca
ttttctcagaagctgtatgagaaattcaagaataacaaaagatttagcaagccaaagctt
tctcgcactgcatttaccatacaacattatgcgggagaagtaacctatcaatctgatcat
ttcctggacaaaaacagagattacgtggtagtagaacatcaagagttacttaatgcttcc
aggtgctcatttgtgtcaggattattcccatcagtactagaggagaacacaaaagcatca
aagacttccattgctactcgcttcaagtggcaactccaagaactaatggagacgttgaat
tctacggaacctcattacattagatgcattaagcccaataatattcttaagcctactgca
tttgagaacatcaatgtactgcagcaacttcggtgttcaggtgttcttgaagctattaga
atcagttgtgctggatatcctacaagaaaaatatttcatgattttctctatcagcttcgc
attcttgctcctgaagttttcatggaaaaaaacaatgaaaaggtgttgtgccaaaagatt
ctggacaagatggaactccatggttatcagattggaagaacaaaagtgttcctgagagct
ggtcagatggctgaattagatgctagaagaactgaagtgcggaataaagcagctagagct
gttcagagtagattccgcactcatgctgctcgtgaaaaattccttgtattacgcaagaca
tcaatatcttttcaatcttttgttagagtaatactcgcttttaaattacgtgttctactg
agaaaacaagctgcggcgttgcaaatacagaaaagttaccgctgctatgttgcttggaac
tcttattctaagttacgctcttcagcaattacgttgcagacaggattaaggttgtttggt
gtttataaggaatacaatatcagaaaacaaaataaagcctctattcatatccaggcttgg
tggcgatgccatagagattattcgaactactgtaaaattaagagatcagtgttaatttat
cagtgtgcatggagaagacgggttgctagaggagaactcagaaaactcaaaatggctgca
agggacacagaagccctaaaggtggagaaggagaaacttgaggagcatgttgaagagctg
actagctgtttaggcttggaaaagaaacttaggactgatctggagaagaacaaagcagga
gaaatttccaaactacaggctgctcttcgtgagatggagcggcgggtggaagaagccaca
gagatgcaggaaagagaattagccaagagggccattgaagaagctttagctcaagaaaga
gaaaagatcacttcattgactaatgaagttgaggaactgaaggtactactactaagagaa
caagaagaaaatagtgcaactaagagtgcacttgtgattgctcaggaagaaaatgatgca
ttgaaaagaaaaattgtggtcgcagatgaaaacgtggagcaacttagagatactgtaaag
agatttgaaaagaacgcgacagaactagagtcttcactaatgatggaaaaggaacaaaac
gtgactactagaagggaactaactgaagcacaccaaagggtggatgaactactgatggaa
attgcagatgccaatggaaaatccacagagcttctgactactgtacaaaggctgcaaaaa
agcttaattgagggggaggctactttacttacagaacgacaagaaagtgaggcaaccaag
aaatcacttagtgaagctcatgcagaaatcgaggaactgctcaataaaattaaagtagct
gaacaagacattagtaacttccaagacaacacacaaagacttgaagtaactgctacaaca
ttggagacttcattgttagctgaaaaacaaaagagtactgcaatcttttcacaattagct
gaagcacagcaggatattgaagtactacagaagaaatttgcagacgctaataggacaaat
gatctacttcaagattctttgaaaaggtgtgaggaaaatgcgaccacaagggatggatta
tatgtagcagaaaggaaagagcatgatgaaaccaagcaagcactttcgaaagctcaggaa
agaaattgggaattgcttaggaaagttgatgatagcgagaaaactataaacaagatgctg
gagaatgctcagagacttgagaagcatgcaacagcaagggaatctttgctgcttaagaca
aaacaaaatcttgactgcacaacaaaagcattaactgaagctcgagggagaaaccgagac
ttgatgataagttttgaggattcagctaaaaaaatcaatatgcttgaggattcagttagc
agactagaagaatgcatagcagagaaagactctttgttggaagtagaaagacaagaacac
caaacaactaacgaagatgtagccaatgcccaaaaaaagatcaatgaattaatacacgag
tcacaacagtttgaagaaacaagaaaacaattggaagataccatcaagaggattgaagca
gatgctactgccagagatgcacttttgttatcagaaaaacaagaacatgagacgaccaag
aaagttctaattgaaactcagtggagaaatgaggagctaatcaagaaaattcaagattat
gataaaaataaccttcagcttcagctaactgttgagaggcttcaggaaaatgcatctgct
acagaggttttaatgttgagagaacgagaacaaaacaatgcaaccatgaaagcacaagct
gaaagtcaagaaagaaatttgcagtttctaaagaagctcgaggatgttgacaaaaaaatt
ggtcttcttcagggcagtgtacaaagacttggtgataatacagcaaaagatgctttgctg
ctatctgagagacgtgagaaggatgcactgaagaaagcacttactgagagtgaatacaaa
aatgaagagttactgatgaaaactgatgaagccaacaaaaaagttgagcatcttcaaaac
actataaattcgcttaaggaggatatggcagcttcattggaagctgaaagacaagaaaac
gaaacaatcaggaggtcccttgttgaagctcaggagagaaatgatgtgttatttaagaaa
gttagggatagtgaatacagagcccaccagcttcaagatactgtgcagaagcttcaagta
gatgccatatcaagattgtctaactttgcaatggagaaacaagaaggcgatgttgtcaaa
aacgtacatattgaggctcatggaagaaatgaaaatctaataagaagaaatgaagacctc
ctaaaaagaaatgatgacttggtcaagaagattgaagattctactatacttgttactcag
cttcgcgagaacctagaaaggttagaaggcaaagctgccaacttagagtccgaaaatcaa
gcacttcgtcaacaagcaattacaactcctccatctacagccaagtctcaagctgcatgc
tctaaaatcaatgaatttcaacagagatgtccagaaaatggtcatattttaaatggcaac
gcagcatatgctgaaatgaagtcctcacttggtccaacagaaacaagagcctcaatgggt
agttcccctgatttgattagccacaaggattatgaaaatgggcaaaggttacttaatgaa
gtatatcagccttttcagcaccagcaacccctgaatcatcagcagttattgctgaaatac
attacccagtatcttggattttctggcagtaaaccaattgctgctcctcttatatactat
tgtcttcttcattggagatcttttgaagaagcaaagacaggtgtctttgacagtattata
caagttgtaaactcagcaactgaggctcgacatgatacaaggggcttggcctattggtta
tccaacttgtccacattatcagtcctactgcaacgctcattcaaagtttccaggacaaca
gtctcaactccacataggcgaagattttcctgcgagaggatttttcaagccaatcaaact
tcaaacagtggacttgcttatttcagtgctcaaatcgatggagctattgggtttcaccaa
attgaagcaaaatatccagctttgcttttcaagcagcagctagtggatcagattgaaaag
gtgtacggaatgataagcgatagaatgaagaaggagctaaacccattacttgagttgtgt
atccaggatccaagaacttcttactcgactcaagcaaaggcctcgctgtctcctgctagt
ggttttggccaacaggaacaactcatgcattggctgagcatcgtgaaaatcttcaacaac
tatctgcatgttctcagagccaatcatgttcccacaattttggtccaaaaattgcttacc
cagatattttctatggtcaatgtacaattatttaacaggctcctcttgcggcgtgagtgt
tgttcctatagcaacgggcaatacatcaaagatgggctaactcaactaaaacattggtgc
aatgacgtcagtcgagagtttgcagattccgcatgggcagcactgaggcatataagacaa
gctgttgactttgtggtaatttctctaaagccaataaggacatgggatgagatacgcaat
gatatttgcccggatctcagtttgcagcagctagagaggatagttggtatgtattgggac
gatgtcaatggaacgaatgtaacatcagctgagttcatatcaagcatgagagctacaatg
cgtgaggaatcaaatagcgtctccagcttttcagttcttctggatgatgattccagcata
cccttttcacttgaagacattgccaagtccatgccaaacattgaggacacgtcagttaat
gacctgctaccttttatccgcgagaaccagagctttacctttatattgcagtag
DBGET
integrated database retrieval system