Panicum virgatum (switchgrass): 120698009
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Entry
120698009 CDS
T07260
Name
(RefSeq) glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic-like
KO
K00134
glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:
1.2.1.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00010
Glycolysis / Gluconeogenesis
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
pvir_M00002
Glycolysis, core module involving three-carbon compounds
pvir_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
120698009
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120698009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120698009
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120698009
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.12 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
120698009
Membrane trafficking [BR:
pvir04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
120698009
Exosome [BR:
pvir04147
]
Exosomal proteins
Proteins found in most exosomes
120698009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gp_dh_C
Gp_dh_N
DapB_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
120698009
NCBI-ProteinID:
XP_039837374
LinkDB
All DBs
Position
3K:17648926..17652894
Genome browser
AA seq
337 aa
AA seq
DB search
MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGHWKHSD
IKLKDSKTLLFGEKPVTVFGFRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKK
VIISAPSKDAPMFVVGVNEDKYTSDINIVSNASCTTNCLAPLAKIINDNFGIIEGLMTTV
HAITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPELNGKLTGMSFRVPTV
DVSVVDLTVRLEKAASYEDIKKAIKAASEGPLKGIMGYTEADLVSTDFTGDSRSSIFDAK
AGIALNEHFVKLVSWYDNEWGYSNRVVDLIRHIFKTQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagattaagatcggaatcaacggtttcggaaggatcggcaggctcgtggcccgt
gtcgccctccagagcgaggatgtcgagctcgtcgccgtcaacgaccccttcatcaccact
gagtacatgacctacatgttcaagtacgacaccgtgcacggccactggaagcacagtgac
atcaaactcaaggactccaagacccttctcttcggtgagaagccggtcaccgtcttcggc
ttcaggaacccagaggagatcccgtggggtgaggctggcgccgactatgttgtggagtcc
acaggtgtcttcactgacaaggataaggctgcggctcacttgaagggtggtgccaagaag
gttattatctctgctccaagcaaagatgccccgatgtttgttgttggtgtcaatgaggac
aagtacacctcagatattaacattgtctccaatgctagctgcaccacaaattgccttgct
cccctcgctaagatcatcaatgacaactttggtatcatcgagggtctgatgactactgtt
catgccatcactgccacccagaagaccgttgatgggccatcagccaaggactggagaggt
ggcagggctgccagcttcaacatcattcccagcagcactggtgctgccaaggctgttggt
aaggttcttcctgaattgaacggcaagctcactggtatgtctttccgtgttccgacagtt
gatgtctccgttgttgacctcactgttagacttgagaaggctgcctcgtatgaggatatt
aagaaggctatcaaggccgcgtctgaggggcctctcaagggtattatgggatacacagag
gcggatttggtttccaccgatttcactggtgacagcaggtcgagcatctttgatgccaag
gctggaatcgctctgaacgagcacttcgtcaagctcgtctcttggtacgataacgagtgg
ggctacagcaaccgtgtcgtcgacctgatccgccacatattcaagacccagtag
DBGET
integrated database retrieval system