Panicum virgatum (switchgrass): 120698016
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Entry
120698016 CDS
T07260
Name
(RefSeq) protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein-like
Organism
pvir
Panicum virgatum (switchgrass)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP2C
Pkinase
cNMP_binding
PK_Tyr_Ser-Thr
Kinase-like
PP2C_2
DUF5793
Motif
Other DBs
NCBI-GeneID:
120698016
NCBI-ProteinID:
XP_039837390
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All DBs
Position
1K:17810680..17818480
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AA seq
1083 aa
AA seq
DB search
MGCSASKCCSQLKCSLCSNGCLGQTPDSPRESRGKSSRGRGKADSTGSDDSSDDLGEDDD
ALNQMNATRESTVGISRLSRVSSQFLPPDGSRKVQVPLGNYYLRYSFLSQRGYYPESLDK
PNQDSYCIHTPFGTSPDDHFFGVFDGHGEYGAQCSQFVKRRLCENLLRDNRFRTDAVLAL
HAAFVATNLQLHADNLDDSMSGTTAITILVRGKTIYVANTGDSRAVIAEKRGDDIVAVDL
SIDQTPYRLDELERVKECGARVLTLDQIEGLKNPDVQCWGTEESDDGDPPRLWVQNGMYP
GTAFTRSIGDSVAESIGVIADPEIFVLDLNSKNPFFVLASDGVFEFLSSQTVVDMISKYK
DPRDACAEIVAESYRLWLQYETRTDDITIILVHINGLTDMESTQTVTKVSLQPPQQVVGL
AGSESPLIVTSNTNNQRSRHDLSRARLRAVESSLEDGQLWVPPSPSHRKTWEEQAHIERV
LHDHFLFRKLTDSQCHVLLDCMQRVEVKPGDIVVQQGGEGDCFYVVGSGEYEVLAIQEED
GKEITKVLHRYTADKLSSFGELALMHNKPLQASVRAVTSGTLWALKREDFRGILMSEFSN
IPSLKLLRSVELFTRFTVLQLTQLAESLVEVSFADGQTIVDKNDDVSALYVIQRGRVRLI
LAADQMNSDTWDLVSAQTKQAQSSQQNDNYVVEIDEGGHFGEWALIGETISFTAIAVGDV
TCSTIAKEKFDTIVGPLPKLSQADARIKESLVTKKNAADDDFPFRRVQLYDLEWKMCIYA
ADCSEVGLVQIKGSDKIRSLKRFYIKRVQDLHKEEQVFEEKELMKSLSQSACVPEVLCTC
SDESYLGILLNCCLCCSLASILHTPLNESSAKFFAASVVIALEELHQKSIIYRGVSADIL
MLDRSGHLQLVDFRFAKKMEGERTYTICGIADSLAPEIVLGRGHGFPADWWALGVLIYFM
LQSDMPFGSWRESELEPVTKIAKGHLVIPSTFSAEVVDLITKLLVVDENVRLGTSGAEAV
KKHPWFDGFDWEQVASGTYAVPDEVTERINSCIETLNEDLTASPSVSIEDPDDHTAPEWI
QDW
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgggctgttcagcttccaaatgttgttcacaactgaagtgttctttgtgctcaaatggg
tgcctcggtcagacacctgactccccaagggaatcaagggggaagtcaagccgaggcagg
ggaaaggctgattccactggttcagatgactcttctgatgatcttggggaagatgatgat
gctttgaaccaaatgaatgctacaagggaatcaactgttggcatcagccgactatcgagg
gtctcatcacagtttcttcctcctgatggttcacgcaaagttcaggtccctttgggtaac
tattatctgagatactccttcttgtctcaaagaggttactacccagaatcactggacaag
ccaaaccaagatagctactgcatacataccccatttggaacaagtcctgatgaccacttc
tttggtgtgtttgatggtcatggagaatatggagcccagtgctcacagtttgtgaagcga
agattatgcgagaacctgctcagagataatcggttccgtacagatgctgtgcttgctctt
catgctgctttcgtggcaacaaacttgcaacttcatgccgacaatttggatgactccatg
agtggtactactgcaatcactatattggtcaggggtaaaactatatatgttgcaaatact
ggcgactcacgtgctgttattgctgaaaaacgaggggatgatattgttgctgtcgacctc
tccatagatcaaactccttaccggcttgatgagcttgaaagggtcaaggaatgtggtgct
agagttctgacgttagatcaaatagaggggctaaagaacccagatgtgcagtgctggggt
actgaggaaagtgatgatggcgatcctccaaggctatgggtgcaaaatggcatgtaccca
ggaactgcttttacacgtagcattggagattctgttgctgagtccattggtgtcattgca
gatccagagatttttgttctggatctcaattccaagaatccattttttgttctagctagt
gatggggtttttgagttcctttccagtcaaacagtcgttgacatgatttctaaatacaag
gatcctcgagatgcatgtgcagaaattgttgctgagtcctatcgtctttggctacagtat
gaaactcgcacagatgatattacaatcatacttgtgcatattaatgggttaactgatatg
gaatctacccagactgttacaaaagtgtctttacaacctccacagcaagtagtaggattg
gcaggttctgaatcaccactaatagtaacttccaacaccaacaatcagcgttccagacat
gatttatcacgcgcacgactgagggctgttgaaagttctctggaagatggtcaattatgg
gtcccaccatctccatcacatcgaaaaacatgggaagagcaagcgcatattgagcgggtg
ctacatgatcatttcctcttcagaaagcttactgactctcaatgtcatgttctacttgat
tgtatgcaacgagttgaggtgaaacctggggatatagtagtgcaacagggtggcgaaggt
gactgtttctatgtagttggtagtggtgagtatgaagttctggccattcaggaagaagat
ggaaaggaaataaccaaggttctgcatcggtatacagcggacaagctttcttccttcggg
gagctagcactaatgcataataagccacttcaagcttctgttcgtgctgtgaccagtgga
acattgtgggctctaaagagggaggattttcggggaattctgatgtcagaattttcaaac
ataccatcattgaaattgctccgatcagtagagctgtttacaagatttacagtgcttcaa
ctaactcaacttgctgagtcacttgttgaagtatcttttgcagatgggcaaacaatagta
gacaagaatgatgatgtctctgcattatatgtcattcaaaggggtcgtgtgagacttata
ttggcggctgatcagatgaactcagatacttgggaccttgttagtgctcaaacaaagcag
gcacaaagcagtcagcaaaatgataattatgtggttgagatagacgagggaggacacttt
ggagagtgggctctcattggtgaaaccattagtttcactgctattgctgttggtgatgtg
acttgttctactattgcaaaggagaaattcgatacaattgttgggcctttgcctaaactg
tcacaagctgatgccaggattaaagaatctctggtcactaagaagaatgccgcagatgat
gactttccctttaggagagtgcagctatatgatttggaatggaaaatgtgcatatatgct
gctgattgcagtgaggttggtctcgtccaaattaagggctctgacaagatcagaagttta
aaaaggttttacatcaagagagtacaagatctccataaggaagaacaagtctttgaggaa
aaggaacttatgaaaagcttgagccaatcagcttgtgtgccagaagtcttatgcacttgt
tctgatgagtcatatctaggaatattgctgaattgctgcctttgttgctcactggcttca
atacttcatacaccgctaaatgagtcatctgcaaagttctttgcagcctcagttgttatt
gctctagaagaacttcatcagaagtccattatatatagaggtgtttcggcagacattctt
atgcttgacagatcaggacatctgcagctggtggattttaggtttgcaaagaaaatggaa
ggtgaaaggacatacacaatatgtgggattgctgactctctagcaccagagatagttctt
ggtaggggccatggatttcctgctgactggtgggcacttggggtcttgatctatttcatg
ctgcagtctgacatgccatttgggtcctggagggagagcgagctggaacctgttacaaaa
attgccaaaggccaccttgttattccatcaacgttcagtgcggaagttgttgaccttata
accaagctacttgtggtagatgaaaatgttcgccttggaaccagtggtgctgaagctgtg
aaaaaacatccctggtttgatggctttgactgggaacaagtggcatctgggacttatgca
gtacctgatgaagtcactgagcgcatcaatagctgtatagaaactcttaatgaggacttg
acagcgtctccttctgtgtctattgaagacccagatgatcatactgctccagaatggatc
caagattggtga
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