Panicum virgatum (switchgrass): 120698017
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Entry
120698017 CDS
T07260
Name
(RefSeq) calcineurin B-like protein 4 isoform X1
KO
K06268
serine/threonine-protein phosphatase 2B regulatory subunit
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120698017
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Calcineurin (PPP3/ PP2B)
Regulatory subunits
120698017
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Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
EF-hand_8
EH
SPARC_Ca_bdg
DUF5580_C
DUF294_C
Motif
Other DBs
NCBI-GeneID:
120698017
NCBI-ProteinID:
XP_039837386
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All DBs
Position
3K:complement(17732173..17734762)
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AA seq
209 aa
AA seq
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MGCATSSQFGAARVMEPQVLASETSFTVDEVEALYELYKRMSFSIIKDGLIHKEEFQLAL
FRNSEKANLFADRVFDLFDLKRTGVIDFEEFVRSLSVFHPKAPTSEKTSFAFKLYDLRGT
GYIEKEELRELVLALLDESDLCLSDSTVEAIVDNTFSQADSNGDGKIDPEEWKEFVKKNP
AALRNMSLPYLQDITMAFPSFITRSEAKD
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcgcgacgtcgagccagttcggggcggcgcgcgtgatggagccccaagtgctc
gcgtccgagacctcattcacggtggacgaggtggaggcgctgtacgagctgtacaagagg
atgagcttctccatcatcaaggacggcctcatccacaaggaggagttccagctcgccttg
ttcaggaacagcgagaaagccaacctcttcgccgacagggtcttcgacttgttcgatctc
aagcggactggggtgatcgatttcgaggaattcgtgcggtcgctcagcgtattccaccct
aaagcgcccacgtcggaaaagacatcgttcgcgttcaagctgtatgatctaagggggaca
ggttatatcgagaaagaagagctcagggagttggtcttggcgcttctagatgagtctgat
ctctgcctttcagatagcaccgtcgaggcgattgtcgataatacattcagtcaagctgac
tcgaatggagatggcaagatagatcctgaggagtggaaggaatttgtgaagaagaacccg
gcagcattgagaaacatgtcgctcccctatttgcaggacatcaccatggcatttcccagc
ttcataacgcgatcggaagccaaagactga
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