Panicum virgatum (switchgrass): 120698021
Help
Entry
120698021 CDS
T07260
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120698021
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120698021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
120698021
NCBI-ProteinID:
XP_039837400
LinkDB
All DBs
Position
3K:complement(17784021..17787332)
Genome browser
AA seq
378 aa
AA seq
DB search
MATINPFDILGADDNDDPTQLLAAAAAAKQKAELKKQAAAAAAAATGKGAQPAPAKLPTK
LAPPAQAVRESRSGGAPSRGRYGRGERGRGRGGRGYGQNRENGSEDANGFQGGYGAGGGA
RAGGEEDAQDRGPRPPYRGGGGGRWGGYRDGEFGDDSERPYRRTYERHSGTGRGFEMKRE
GAGRGNWGTTTDEIIAQETEEGLKLDEKAPVPEKQGALEDAPQAEENKDNKDTNEEEEKE
EDKEMTLEEFEKIREEKRKALLALKTEERKVEVDKDLQSMQPLSTKKGNDEIFVKLGSDK
DALKKKENAERDERAKKSVSINEFLKPADGERYYGGRGRGRGRGDRGGFRAGYGGGYRAP
PVAPAIQDKFQFPSLGGK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatcaatccctttgacatcctgggcgccgacgacaacgacgatcccacgcag
ctgctggccgctgctgcggcagcgaagcagaaggccgagttgaagaagcaggcggcggcg
gcggcggctgcggccacaggaaagggcgcgcagccagcccccgccaagttgccaaccaag
cttgctcccccagcccaggccgtgagggagtctcgcagtggtggtgctccctctcgtgga
cgatacgggcgtggagaacgcggccgtggcagaggcgggcgagggtatggacagaaccgt
gagaatggcagcgaagatgctaatgggtttcagggaggatatggtgcgggaggtggtgcc
agggctggaggtgaagaagatgcccaagacagaggtcctcggccaccctaccggggaggt
ggaggtggccggtggggtgggtaccgtgatggtgagtttggtgatgactctgagaggcca
taccggaggacctatgagcgccatagcggtactggccgtgggtttgaaatgaagcgcgag
ggtgcaggccgtgggaactggggaactaccactgatgaaattatcgcccaggaaactgag
gaaggcctgaagctggatgagaaggcccctgttccagagaagcagggtgcactggaggat
gctccacaggcagaggagaacaaagataacaaggacacaaatgaggaagaagagaaggaa
gaggataaggagatgaccctggaggagtttgagaaaataagggaggaaaagcggaaggcg
cttcttgccctaaagactgaagagaggaaggttgaagttgataaggacctgcagtccatg
cagccgctttccaccaagaaaggaaatgatgaaattttcgtaaaactgggttctgataag
gatgctctgaagaagaaagaaaatgctgaacgtgatgagcgtgctaagaagtctgtgagc
atcaatgagttcttgaaacctgctgatggagaaaggtactatggtgggcgaggtcgtggc
aggggtcgtggggaccgtggtggcttcagagcgggatatggtgggggttaccgtgctcca
ccagttgctcctgcaattcaagataaattccaattcccgtcgcttggtgggaagtga
DBGET
integrated database retrieval system
