Panicum virgatum (switchgrass): 120698046
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Entry
120698046 CDS
T07260
Name
(RefSeq) respiratory burst oxidase homolog protein F-like
KO
K13447
respiratory burst oxidase [EC:1.6.3.- 1.11.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120698046
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120698046
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Gene cluster
GFIT
Motif
Pfam:
NAD_binding_6
NADPH_Ox
FAD_binding_8
Ferric_reduct
EF-hand_7
EF-hand_1
EF-hand_6
DUF7006
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
120698046
NCBI-ProteinID:
XP_039837426
LinkDB
All DBs
Position
3K:18014506..18024056
Genome browser
AA seq
968 aa
AA seq
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MRGGGGGGPPGVGTPGRPRWGSGVTTPRSLSTGSSPRGSDRSSDDGEELVEVTLDLLEDD
NIVLRSVEPAAAAAAGLGVGASPSSSGAPAPPPPRRHPEPSSGAPSRSRSPAMRRTSSHR
LLQFSQELKATASRAKQFSQDLTKRFTRTQSRANLAGEAGAAAAAAAAPSGIDAALEARA
QRRRRAQLDRTKSGAQRAIRGLRFISGGNKTSNAWIEVQANFDRLARGGYLSRDDFPECI
GMTESQEFAMELFDTLSRRRQMQVDKINKDELREIWQQITDNSFDSRLQIFFDMVDKNAD
GHITEAEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPEGLGYIELWQLETLLLQKD
TYVNYSQALSYTSQALSQNLAGLRKRSPIRKISSTLNYYLEDNWKRLWVLALWIGIMAGL
FIWKFIQYRNRYVFHVMGYCVTTAKGAAETLKLNMALILLPVCRNTITWLRNTKAARALP
FDDNINFHKTIAAAIVVGVILHAGNHLVCDFPRLISSPEEKYAPLHDYFGDKKPTYLDLV
KGVEGITGVIMVVCMLIAFTLATRWFRRSLVKLPRPFDKLTGFNAFWYSHHLFIIVYIAL
VIHGECLYLIHHWYKKTTWMYLSVPVGLYVGERTLRFFRSGSYSVRLLKVAIYPGNVLTL
QMSKPPTFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSIHVRQLGDWTRELKRVF
SAACEPPVGGKSGLLRADETTKKTLPKLLIDGPYGSPAQDYSKYDVLLLVGLGIGATPFI
SILKDLLNNIIKLEEEEEASSDLYPPIGRSKAHVDLDTLMRITSKPKRVLKTTNAYFYWV
TREQGSFDWFKGVMNEIAELDQRNIIEMHNYLTSVYEEGDARSALITMLQALNHAKNGVD
IVSGTKVRTHFARPNFKKVLSKIATKHPYAKIGVFYCGAPVLAQELSKLCYEFNGKSTTK
FEFHKEHF
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggaggaggaggaggagggccgccgggcgtcggcacgccgggccgcccgcgatgg
ggctccggggtgacgacgccgcggtcgctgagcacgggctcctcgccgcgcgggtcggac
cggagctccgacgacggggaggagctggtcgaggtgacgctggacctgctggaggacgac
aacattgtgctgcggagcgtcgagccggccgcggccgcggctgccgggctgggggtgggg
gcgtcgccttcgtcgtcgggggcgccggcgcctcccccgccccggcgccacccggagccg
tcgtccggggcgccgtcgcggtcgcggtcgccggccatgcgccggacctcctcgcaccgc
ctgctgcagttctcgcaggagctcaaggccaccgccagccgcgccaagcagttctcgcag
gacctcactaagcgcttcacgcgcacccagagccgcgcgaatctcgccggggaggcaggc
gccgccgccgccgccgccgccgcgccctcgggcatcgacgccgcactcgaggcccgcgcg
cagcgccgccgccgggcgcagctcgaccgcaccaagtccggcgcgcagcgcgcgatccgc
ggcctccgcttcatcagcggcggcaacaagaccagcaacgcctggatcgaggtccaggcc
aacttcgaccgcctcgcgcgcggcggctacctctcccgggacgacttccccgaatgcata
gggatgacggagtcgcaggagttcgcgatggagctgttcgacacgctcagccgccgccgc
cagatgcaggtggacaagatcaacaaggatgagctgcgcgagatctggcagcagatcaca
gacaacagctttgactcgcgcctccagatcttcttcgacatggtggataagaatgcagat
ggccatatcacagaggcggaagtgaaagagattattatgttaagcgcttcagctaataaa
ctgtcgagacttaaggagcaagctgaagagtatgccgccttgatcatggaggaacttgat
cccgaaggtcttggctacattgagctctggcaattggagacactgctactgcaaaaggat
acctatgtaaactacagccaggccttgagctacacaagccaggcattaagccagaacctc
gctggtcttaggaagaggagtccgatcagaaaaattagcagcacattgaactactatctg
gaggacaactggaagcgtctgtgggtccttgcattatggattgggataatggctggatta
ttcatttggaagttcatccagtatcgcaaccggtatgtctttcatgtgatgggctactgt
gttacaaccgcaaagggtgctgctgagactctcaagctgaacatggcacttattctcttg
cctgtatgccgcaacaccatcacctggctgcggaatacgaaagctgcaagggcattgcca
ttcgatgataacataaactttcacaagactattgcagcggcaattgtggttggtgttatc
cttcatgcagggaaccaccttgtatgtgattttccgcggctcataagttcaccggaagag
aagtatgctccgctgcacgactactttggggataagaagccaacatatttagacctggtc
aaaggagtggagggcataacaggggtaatcatggttgtgtgcatgcttattgcatttact
ctagcaacaaggtggttccgccgtagcctggtgaagcttccaaggccatttgacaaatta
actggcttcaatgctttctggtactcccatcatctattcatcattgtgtacatagcactc
gttattcatggagagtgtttataccttatccaccactggtacaaaaagacgacatggatg
tatctctcggtgcctgttggtctgtatgttggggagaggactcttaggttcttcagatcg
ggcagttattctgtccggctattgaaggtggccatatatcctggtaatgttttgacattg
cagatgtccaagcctcccacattccgttacaagagcgggcagtatatgtttgttcagtgc
cctgctgtttcaccctttgaatggcatcctttctcaataacttcggcacctggggatgac
tatctaagcattcatgttcggcaacttggtgattggacacgggagctcaagcgggtattc
tcagcagcttgtgagccaccggtgggtgggaaaagtggccttcttcgagcagatgaaaca
actaagaaaaccttaccgaaacttctgattgatggaccatatgggtctcctgcacaagac
tacagcaagtatgatgttttactacttgttggattagggattggtgccacaccttttatt
agcatactgaaagacttgctcaataacattatcaaattggaggaagaggaagaagcttcc
agcgatctttacccaccaattggtcgcagtaaggcacatgttgatcttgacacccttatg
aggattacctcaaaaccaaagagggttttgaagacaacaaatgcttacttttattgggtg
acacgcgaacaaggctcttttgattggtttaaaggagtcatgaatgagatcgcggaacta
gatcaaaggaatataattgagatgcacaactatctcacaagtgtttatgaggaaggggat
gctcggtcagcactcatcacaatgctgcaagctctcaatcatgccaagaatggcgttgac
atagtttcaggaaccaaagtccggacacattttgcaaggccaaattttaagaaagtccta
tctaagatagccaccaaacatccttatgctaaaataggagtgttctactgtggggctcca
gttttggcacaggaactaagcaaactttgttatgaattcaatggcaaatctacaacgaaa
ttcgagttccacaaggagcatttctga
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