Panicum virgatum (switchgrass): 120698082
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Entry
120698082 CDS
T07260
Name
(RefSeq) proteasome subunit alpha type-1-like
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120698082
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120698082
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120698082
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120698082
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
120698082
Peptidases and inhibitors [BR:
pvir01002
]
Threonine peptidases
Family T1: proteasome family
120698082
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
120698082
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120698082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
120698082
NCBI-ProteinID:
XP_039837497
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All DBs
Position
3K:complement(18572795..18584961)
Genome browser
AA seq
266 aa
AA seq
DB search
MFRNQYDTDVTTWSPAGRLFQLEYAMEAVKQGSACVGLCSLTHVVLASVNKPASDLCSHQ
RKVFRVADHAGVALAGLTADGRVLSRFLRNECINHSFAYEAPLPVSRLALRLADKAQVCT
QRSWKRPYGVGLLVAGLDETRSHLYYNCPSGNYFEYQAFAIGSRCQAAKTFLERRFKGYK
DYTPEQLVKDALSAIKETLQGEKLSSSNCTVAIVGRKDDGTGEPFKLIDATRIQEIIDSM
EAAEEAPTEPSSMQEGRGSDAAPMDI
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgttccggaaccagtacgacaccgacgtgacgacgtggagccccgcggggcggctcttc
cagctggagtatgccatggaggccgtcaagcagggctcagcctgcgtcggcctctgctct
ctcacccacgtcgtccttgcctccgtcaacaagcccgcctccgacctctgctcccaccag
cgcaaggtcttccgcgtcgccgaccacgcgggggtcgcgctcgcggggctcaccgccgac
ggccgcgtcctctcacggttcctccgcaacgagtgcatcaaccactccttcgcctacgaa
gctccgctcccggtgtccaggctcgcgctacgcctcgcggacaaggcgcaggtttgcaca
cagcgttcatggaagaggccttatggtgttgggctccttgtggccggactggacgagaca
cgatctcatctctattataactgccccagtgggaattactttgagtaccaggcatttgct
attggttctcgctgtcaggccgccaagactttccttgagcgcagattcaagggctacaag
gactacaccccggagcaactcgtcaaggacgccctgtctgccataaaggaaacactgcaa
ggcgagaagctgagcagctccaactgcacggttgccatcgtcggccgaaaggatgatggc
acaggagagcctttcaagctgattgacgcaacgaggatccaagaaataattgactccatg
gaggcggctgaggaggcgcccacggagccgagctccatgcaggagggcaggggctcagat
gctgcgcccatggacatctag
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integrated database retrieval system
