Panicum virgatum (switchgrass): 120698091
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Entry
120698091 CDS
T07260
Name
(RefSeq) nuclear pore complex protein NUP35-like
KO
K14313
nuclear pore complex protein Nup53
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120698091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120698091
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120698091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120698091
NCBI-ProteinID:
XP_039837505
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All DBs
Position
3K:18698748..18701128
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AA seq
326 aa
AA seq
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MASLSRSPAASRRGCSVRQSPFFRDLACPIPSHRGVSRFASAASPAAAPSATPPPPPIFT
LDDRYASEDFSPDPTASDLLPLASSPSPRAAASRSPSWDRPRGRTSLSAPGSPMDGVVEP
ARKEVLALPPPASPGSPPPATTAEAQSPVPPAQAPVRTEPVANGGEAEREEWVTVFGFST
GDTNLVLREFEKCGVILRHQSGPRYGNWIHILYQRSYDARKALQKNGIQLSSGLIVGVKS
IDPVHRKQLDERLIGSNQGGFMVSLPSKSLTLKITGASNQLGALPRPYDPKTNTNVNRDA
GRRATGSVAAPAKSIVTNVMDLIFGI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctctcccgctcccccgccgcctcgcgccgcggctgcagcgtgcggcagtcc
cccttcttccgcgacctcgcctgcccgatcccgtcccaccgcggcgtctcccgcttcgcg
tctgccgcgtcccccgccgcggccccctccgccacgccgccgccgccgcccatcttcacc
ctcgacgaccgctacgcctccgaggacttctccccggaccccaccgcctccgacctactt
cccctggcttcgtccccttccccccgcgccgccgccagccgctcgccgtcatgggaccgg
ccccggggccggacatcgctctcggcaccgggatcccccatggatggggtcgtggagccg
gcccggaaggaggtgcttgctttgcctccacccgcgagccctggcagcccgcctcctgct
acgacagcggaggcgcagtcgccggtgccccctgcgcaagcaccggttaggacggagccg
gtggctaacggaggggaggctgaacgggaggagtgggtcaccgtattcggattctctact
ggagataccaaccttgttcttcgggaattcgagaaatgtggagtaatattgagacatcag
tctggtccaagatatggtaactggatccacatattgtaccagcgctcatatgacgctcgg
aaggcccttcagaaaaatggtatccaattaagcagtgggctcatagttggagtgaagtcc
attgatccagtgcaccggaagcagctggatgagaggttaattggaagcaatcaaggaggt
ttcatggtgtccttgccttcaaagtcacttaccctgaagatcacaggtgcatccaaccag
ctaggagctttgccccggccatatgacccgaagactaacacaaatgttaaccgagatgca
ggccgtcgtgcaaccggcagcgttgctgcaccagcaaaatcaattgtaaccaatgtcatg
gatttgatatttggcatttga
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