Panicum virgatum (switchgrass): 120698169
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Entry
120698169 CDS
T07260
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120698169
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120698169
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120698169
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120698169
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120698169
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120698169
NCBI-ProteinID:
XP_039837633
LinkDB
All DBs
Position
3K:complement(19651696..19659663)
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AA seq
640 aa
AA seq
DB search
MAPTAEPPSPPPPRRPRTGPPPGLKNLGNTCYLNSVLQCLASTPPLATFCLASRHSNLCK
KVFPNRDKECAFCVLERQIARLLRADAGALDSPAKIIRCMPLFAEHFRWGRQEDAHEFLR
YVVDACHTAGLSMHKRLPAAVANGNCGEEEGRGQGTCMIMRETFGGALLSQVKCLVCKVE
SNKTDEIMDISLDLPGSSSVADALARFFQPEILEGANKYSCERCKKLTSARKQMFILRAP
KVLVIQLKRFEGINGGKINRSIEFKEALVLSDFMYNKNQDSQPAYNLFGCIVHSGLSPES
GHYYAYVKDAVGRWFCCNDSHVSLSSSQNVLSEKVYILFYILNSKNQKPSPNGCSSTAAK
PFSTNGNGISSSSPNETLKIPLVKQNGSCSTKGNALLPLKNGKIASGPLIKPIHFKNSGT
EKVKSNGKENLPSKMNPEVNESAIQSESNGRKTGKFAEPSKKDADGTMSCGKIDDHSERI
LQDANGNGHSIRSQYLGEASNGNATCAQQYSEQSSGAVTSKSPVSHHEESAKVKDVVNSS
KDSVHLKRQHEEDKFKEVLVKSASSELRLSVWVDDVSNFMRSLKRRRIQNSGIPQDIDAM
RKLLKSDSERIFRSKVPESLVESLIQRLRSYFEGIYSPHA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaccgcggagccaccttcgccgccgccgccgcggcgcccccgcacgggcccg
cccccggggctgaaaaacctcggcaacacctgctacctcaacagcgtcctccagtgcctc
gcgtccacgccgcccctcgccacgttctgcctcgcctcgcgccactccaacctgtgcaag
aaggtattcccgaacagggacaaggagtgtgcattctgcgtgctcgagcgccaaatcgcg
cggcttctaagggcagatgcaggggcactcgactcgccagcgaagatcatccgctgcatg
cccctgtttgccgaacacttcagatgggggcgccaggaggatgcgcacgagttcctccgc
tatgtcgtagacgcctgtcacactgctggtctcagcatgcacaagcggctacctgcggca
gttgccaatggaaactgtggtgaggaggagggccgggggcagggtacatgtatgattatg
agggagacatttggtggggcgctgctcagtcaggtgaagtgtcttgtgtgcaaggtagag
tcaaacaagacagacgagataatggatatcagtctcgatctacctgggagcagttctgtt
gctgatgcccttgcccgcttctttcagccggagatcttggagggtgcaaacaaatatagt
tgcgaaaggtgtaaaaagctcacctcagcacggaagcaaatgtttatactcagggcacct
aaggtgcttgtcatacaactcaagaggtttgaggggataaatggtggaaagatcaacagg
agtatagaattcaaggaggcccttgttctttctgacttcatgtataataaaaaccaggat
tcacaaccagcatataatctttttggttgtatcgtccactcagggctctcccctgagtct
ggtcactactatgcgtatgttaaggatgctgttggtcgatggttttgttgtaacgattct
catgtctccctatcaagctctcagaatgttttgtctgagaaggtctatatcctattttat
atactgaattcgaaaaatcaaaagcctagtccaaatggttgctcttctactgcagctaaa
cctttcagcaccaatggaaatggcatatcaagctcctcacctaatgagaccttgaagata
cctttggtaaaacaaaatggttcatgttctaccaaaggtaatgccctgctgcccctgaag
aatggcaagattgcatcaggtccacttatcaagccaattcactttaagaatagtgggaca
gagaaggttaagtcaaatggcaaagaaaacctgccttcaaaaatgaacccagaagttaat
gagagtgctatacaatcagaatcaaatgggcgcaagactggaaaatttgcggaacccagt
aaaaaggatgccgatggtactatgtcttgtggaaagattgatgatcattcagaaagaata
ttgcaggatgcaaatggaaatggccactcgattcgttcccaatatcttggcgaggcaagt
aatggtaatgccacatgtgctcaacagtattctgagcagtcatctggtgctgttacctct
aaaagtccagtttcacaccatgaagagtctgctaaggtaaaggatgtggtgaattcatcc
aaagatagcgtgcacctgaaacgccaacatgaagaagacaagtttaaggaagtgcttgtt
aagtcagcttcttctgagcttcggctgtctgtttgggtggatgatgtctccaattttatg
cgctcactaaagagacggcgaattcaaaactcaggcattcctcaagatattgatgcaatg
aggaagctgctaaagtcagattctgaaagaatatttaggtcaaaagttccggagtcactg
gtggaaagtctaattcaacgcctgagatcatactttgagggcatatattcgccacatgct
taa
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