Panicum virgatum (switchgrass): 120698172
Help
Entry
120698172 CDS
T07260
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120698172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120698172
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
120698172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
Motif
Other DBs
NCBI-GeneID:
120698172
NCBI-ProteinID:
XP_039837636
LinkDB
All DBs
Position
3K:19672418..19675612
Genome browser
AA seq
263 aa
AA seq
DB search
MGEEAKYLETARADRSVWLMKCPPVVSRAWQAASASSSSDAANPNPVVAKVVLSLDLPSG
EEQQEPSLQFKMELAQTNTGNTPKSYSLNMFQDFVPMCVFSESNQGKLSCEGKVEHKFDM
EPHSDNLVNYGKLCRERTQKYMVKSRQVQVLDNDHGMSMRPMPGMVGLIPSGSKEKKKQT
PAKPSDVKRTRRDRTEMENIIFKLFERQPNWALKALVQETDQPEQFLKEILNDLCVYNKR
GPNQGTHELKPEYKKSTGDTDAA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggaagccaagtacctggagacggcgcgggccgaccgctctgtgtggctcatg
aagtgccccccggtcgtctcccgcgcctggcaggccgcctccgcctcgtcctcctccgac
gccgccaaccccaaccccgtcgtcgccaaggtcgtcctctccctcgacctgcccagcggc
gaagagcagcaagagccttccctccagttcaagatggagttggctcaaactaacactggc
aatacacctaaaagctactctttgaacatgttccaagatttcgtgcccatgtgtgttttc
tcggaatctaaccaagggaaactttcatgtgaaggaaaagttgagcataaatttgacatg
gaaccacacagtgataatttggtgaactatggaaagttatgccgtgaaagaacacagaaa
tatatggttaaatccagacaagtgcaggtacttgacaatgaccacggcatgagcatgaga
ccaatgcccggcatggtcggtctaataccttctggttcaaaggagaagaagaagcaaaca
ccagccaaaccatctgatgtcaaaagaactcgtagggatcgcacggaaatggaaaatatt
atattcaagctttttgaaaggcagcctaattgggcactaaaggcgctagtgcaagaaact
gaccagccggagcaattcctgaaggagatactgaatgatctctgtgtatacaacaaacga
ggaccgaaccaggggacgcatgagctcaagcctgaatacaagaaatccacaggcgatact
gatgctgcttga
DBGET
integrated database retrieval system
