Panicum virgatum (switchgrass): 120698191
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Entry
120698191 CDS
T07260
Name
(RefSeq) calreticulin-3-like
KO
K08057
calreticulin
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
pvir04145
Phagosome
pvir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120698191
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120698191
04148 Efferocytosis
120698191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120698191
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pvir04091
]
120698191
Chaperones and folding catalysts [BR:
pvir03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
120698191
Lectins [BR:
pvir04091
]
L-type lectins
120698191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
120698191
NCBI-ProteinID:
XP_039837653
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Position
3K:complement(19826413..19830924)
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AA seq
415 aa
AA seq
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MGRAFLHRALVLSSLLLLASGEIFFEERFDDGWEHRWVKSDWKKSQGQAGTFRHTAGTYS
GDPDDKGIQTTGDAKHFAISAKFSEFSNKNRTLVVQYSLKIEQDIECGGAYIKLMSSHVN
QKKFGGDTPYSFMFGPDICGDQKKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRP
DATYSILIDNREREFGSMYTDWDILPPRRIKDVDAKKPKDWDDREYIEDPDQVKPEGYDS
IPKDIPDPKDKKPESWDDDDDGIWKPRMIPNPEYKGPWKRKKIKNPNYKGKWKTPWIDNP
EFEDDPDLYVLKPLQYVGIEVWQVKAGSVFDNILICDDPDYARHVVDETFAANKEAEKEA
FEGAEKKRKAREEEEARRAREEGERRRRERDRDRGRDHYRDRYKRHRHYDYHDEL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgccttcctccaccgcgcgctggtcctctcgtcgctgctcctcctcgcctcc
ggcgagatcttcttcgaggagcgattcgatgatgggtgggagcaccgttgggtgaaatct
gattggaaaaagagccaaggacaagctggaacgttccggcacacagcgggaacctattct
ggagatcctgatgataaaggtatacaaacaactggggatgccaaacattttgctatatcg
gcaaaattctcagaatttagtaacaagaaccgaacattagtggtccagtactcgctaaaa
attgagcaggatattgaatgtggcggtgcttacatcaaacttatgtctagccatgtcaac
cagaagaaatttggtggcgacacaccttacagcttcatgtttggacctgatatatgtggg
gatcagaaaaagaagctccatctcatactttcgtaccaggggcaaaactaccctatcaag
aaagatctaaaatgtgaaacagacaagttgacacatttttacacatttattctcagaccc
gatgccacttatagcatccttattgataaccgggagagagaatttgggagcatgtacact
gactgggatatccttcctcctcgtaggatcaaagatgttgatgcaaaaaagccaaaagat
tgggatgacagggagtatattgaagatcctgatcaagttaagccagagggatatgactca
attcctaaagacatacctgatccaaaggacaaaaagcctgagtcatgggatgacgacgac
gacggtatatggaagcctagaatgataccgaatccagaatacaagggaccatggaagcgg
aagaaaattaagaatcctaactacaaaggaaagtggaagaccccatggattgacaatcca
gagtttgaggatgacccagacctatatgttctgaaacctttgcagtatgtggggattgaa
gtctggcaggtcaaagccggttctgtttttgacaacattttgatttgtgatgatccggac
tatgcaagacatgttgtagacgaaacttttgctgcaaataaggaggctgaaaaggaggcc
tttgaaggagctgaaaagaagaggaaggctagagaagaagaggaagcacggcgggcgcgg
gaggaaggggagagacgaaggcgagagagggatagggaccgtggcagggaccattacagg
gatagatataagcgtcataggcactacgactaccatgacgagctatag
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