Panicum virgatum (switchgrass): 120698251
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Entry
120698251 CDS
T07260
Name
(RefSeq) structural maintenance of chromosomes protein 4-like
KO
K06675
structural maintenance of chromosome 4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120698251
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
120698251
Condensin II
120698251
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
PUMA_CC
TPR_MLP1_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120698251
NCBI-ProteinID:
XP_039837719
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Position
3K:complement(20550439..20562288)
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AA seq
1244 aa
AA seq
DB search
MAMEISPPQSPARTPGRAARPRLFIKEMVLRNFKSYAGEQRIGPFHKSFSAVVGPNGSGK
SNVIDAMLFVFGKRAKQMRLNKVSELIHNSSNHQNLDSAGVSVHFQEIIDLDDGNYRAVD
GSDFIISRVAFRDNTSKYYINDRASNFTEVTKLLKGKGVDLDNNRFLILQGEVEQISLMK
PKAQGPHDEGFLEYLEDIIGTNQYVEKIEEANKELEVLNEKRTASVQMLKLAEKERDSLE
SAKNEAETYMLKEFSLLKWREKATKLACDDAESRVAQCQENVEDLEKNLASEREKIHQNS
QTVKEMESIYNKHVKRQEDLENNMKSCKNQFKEFERKDVKYREDLKHLKQKIKKLEDKVQ
KDMSKCDESTKEMEESSNLIPQLEGKIPKLQEQLNEEEKLLEQIKESSREETEKLRAELT
QVRTELEPWENQIIEHKGRLDVASAEKELMKQKHDGAQTELTDAQNQMESIKEKVKTKDA
YIVELQEKIEKHQAEASEARKIEQECQHQEDSLIPMEQAARQKVAEMKTTRDSEKNQSTA
LKAILQAKESNEIQGIYSRLGDLGAIDAKYDVAISTAAPAGLNYIVVETINSAQACIELL
RRRNRQETVTCLILEKQTHLLQKIKEKVKTPEGVPRLFDLVKVKDEKMKLAFFHVLGNTV
VANDIDQASRIAYGAQKEFRRVVTLVGEVFEKSGTMSGGGKKVQRGMMGTAIQESISEDA
IKKAENELNNLVDKLNMLREKMNDARKHCRSMEEAKSRLEMELAKAKKEVESMNEQYVYN
EMRLDSLKAASQPKADEVCRMKELDDIISSEQVELNRLTKCSSKLKDQASELQQKIENAG
GLVLKDQKTKVANIQSELDKTSSEINRHKVKITSGEKLVKKLAKTIEESKIDTEKLLAEK
EKMMSIFKEIEKKAFVVQEEYKKTQEMIDNHKDELDKTKKEYTKLKKALDELRASEVDAE
YKLQDTKKLAKEWEMKVKAFRKRLDEIQTNLAKHMDQIQKDAIDPEKLKVTLGDEQLNDT
CDMKRAMEMVALLEAQLKDLSPNLDSIAEYRTKAHLYSERVDELNATTKERDDLKKLYDG
LRKRRLDEFMAGFNIISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWK
NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF
IIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAESMEVPT
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggccatggagatctccccgccgcagtcgccggcgcggacgccgggtagggcggcgagg
ccgcggctgttcatcaaggagatggtcctccgcaacttcaagtcctacgccggagagcag
cgcatcggccctttccacaagagcttctcagctgttgttgggcccaatggcagtggaaag
agtaatgtcattgatgcaatgctctttgtgtttgggaagcgtgcaaagcagatgcgctta
aacaaggtctcggagctcatacacaattcttccaatcatcagaacctggatagtgctggt
gtttctgtccattttcaagaaatcattgacctggatgatggaaactacagagctgtagat
ggtagcgactttatcatctcaagagttgctttccgggacaacacttctaaatactacata
aatgaccgtgcaagcaattttactgaagttactaaattgttgaagggcaaaggagttgac
cttgataataatcgcttcctcatcctccagggtgaggttgagcaaatttccctaatgaaa
ccaaaagctcaaggtccgcatgatgagggttttctagaatatcttgaagacataataggg
acgaaccagtacgttgagaaaattgaagaagctaacaaggaacttgaggtgctcaatgaa
aaacgaactgcatcagtgcagatgctaaaattggctgagaaggaaagagacagtttagag
agtgcaaaaaatgaagctgaaacatacatgctgaaggaattttcacttttgaaatggcga
gaaaaggcaaccaagctggcttgtgatgatgctgaatcacgtgttgctcagtgtcaagag
aatgtggaagatctggaaaagaatcttgcctctgaaagggagaagattcatcagaattct
cagactgtgaaggaaatggagtctatttataataaacatgtcaaaaggcaagaggacctt
gagaataacatgaagtcctgcaagaatcagtttaaagagtttgagaggaaagatgtaaaa
tacagggaagatttaaagcatcttaagcagaagatcaagaagctggaggacaaagttcaa
aaggacatgtcaaaatgtgatgaatcgacaaaagagatggaggaatcatccaatctcatt
ccgcagctggagggaaagataccgaaattgcaggagcaacttaatgaagaagagaagttg
ttagagcagataaaagaatcctctcgagaggaaactgagaaactccgtgctgaacttact
caagtaagaactgaacttgaaccatgggaaaatcaaattattgagcataagggaaggtta
gatgttgcatctgccgagaaagagttgatgaaacaaaagcatgatggagctcaaacagaa
ttaactgatgctcaaaaccagatggaaagtataaaagagaaagttaaaacaaaggatgca
tacatcgtggagcttcaagagaaaatagagaaacaccaagctgaagcatctgaagctcgc
aaaattgaacaggaatgccaacatcaggaggattcactgatccctatggaacaagcagca
agacagaaagttgcagagatgaaaactacaagggattctgagaagaatcaaagcactgct
ctgaaagcaattttgcaagccaaggaatcaaatgaaatacaaggcatttatagccgacta
ggtgatcttggtgcgattgatgcaaaatatgatgtggccatatcaacagcagctccagct
gggcttaactatattgttgttgaaacaataaattcggcccaagcttgtattgagttgcta
cgccgaaggaaccgccaggaaactgtaacttgtttgatcctggaaaaacaaacacacctt
ctccaaaaaataaaagagaaagtaaaaacacctgaaggagttccacgcctctttgatctg
gtaaaggttaaagatgagaagatgaagttagctttcttccatgtcttggggaatactgtt
gttgcaaatgatattgatcaggcttcacgaattgcttatggtgcacaaaaggagttccgt
cgggtagttaccctggttggtgaagtttttgagaagtctggtaccatgagtggtgggggt
aaaaaggtacaacgtggcatgatgggaacagctatccaagaaagcatttcggaagatgct
attaaaaaagctgaaaatgaacttaacaacctagttgataaactcaacatgttgcgtgaa
aaaatgaatgatgccagaaaacactgtcggtccatggaagaagctaaatcccgtcttgaa
atggaactggcaaaagctaaaaaggaggttgagagtatgaatgaacagtatgtttacaat
gaaatgcgactagattccctgaaagctgcttcacaacccaaagctgatgaggtttgcaga
atgaaggagctggatgacatcatatctagtgagcaagttgaactaaatagactcacaaag
tgttcgagcaaacttaaagatcaggcttcagaactccaacagaaaattgaaaatgctggg
gggctggtgctgaaggaccagaagacaaaagttgccaacatccaatctgaacttgacaaa
acaagctcagaaatcaaccggcacaaagttaaaataacttcaggtgagaaattggtgaaa
aagttagccaagactattgaggagtccaagatagacacagaaaaacttcttgctgaaaag
gagaagatgatgtctattttcaaagaaattgagaagaaagcttttgttgttcaggaagag
tataagaaaacacaggagatgatagacaaccataaggatgagcttgacaaaacgaagaaa
gaatacaccaaactaaagaaagcactggatgaactgagagcctcagaggttgatgctgag
tacaaattgcaagatacaaaaaaacttgccaaggaatgggaaatgaaggtgaaagcattc
aggaaaaggcttgatgagattcagacaaatcttgctaaacacatggatcagatccaaaag
gatgctattgatcctgagaaacttaaagtgactctaggtgatgagcaactcaatgataca
tgtgacatgaaaagggcaatggagatggtggcgttgttggaagctcagcttaaagacttg
agcccaaacctggattccatagcagagtaccgcacaaaggctcacttgtacagtgaacgt
gttgatgagctaaatgctaccactaaggaacgggatgatcttaaaaaactgtacgatggg
ttaaggaagagaaggttagatgagttcatggctggattcaacataatatctttgaaactg
aaggagatgtaccagatgattactcttggtggtgatgctgaattggaacttgttgattcc
ttggacccattctcagaaggtgttgttttcagtgtgaggcctccaaagaaaagctggaaa
aatattgccaatctatctggtggtgagaagacacttagttcgctggccctggtgtttgcc
cttcaccactataaacctacccccttatatgttatggatgagattgatgctgcgttggac
tttaagaatgtatcaattgtgggacactatgtgaaagataggaccaaagatgcccagttc
atcattataagtctgagaaacaacatgtttgagctagctgacaggttggttggtatttac
aagacagacaattgcaccaagagtataacaatcaaccctgggagctttgccgagagcatg
gaggtaccgacgtag
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