Panicum virgatum (switchgrass): 120698376
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Entry
120698376 CDS
T07260
Name
(RefSeq) WRKY transcription factor WRKY24-like
KO
K13424
WRKY transcription factor 33
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120698376
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120698376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120698376
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
WRKY
120698376
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Gene cluster
GFIT
Motif
Pfam:
WRKY
Motif
Other DBs
NCBI-GeneID:
120698376
NCBI-ProteinID:
XP_039837876
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All DBs
Position
3K:22085904..22088722
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AA seq
560 aa
AA seq
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MTSTPGSFGTPANSGPVALSFAASSFAGFLGGPASGGEADSSGLSKFKAMPPPSLPLSHP
PASPSSFLNAFSGFLDSPILLTPSLFPSPTTGAIPSEPFNWMGTGENLQAGVKDEQRQYT
DFTFQTAAASVPETVAGAAQQAASFPQSSSMLMAPLGGLGDSYNGALQQQQPWSYQEPTA
QFEAPSSAARAQPDMLGNGGYTAVPAAVPGFREQSNRPPSDDGYNWRKYGQKNMKGSENP
RSYYKCSFPGCPTKKKVERSPDGQVTEIVYKGTHNHPKPQSTRRNSSSAPAAPASASSYV
LQSASDAAAEHSFGGALSGTPAATPENSSGSYGDDEINGVSSRLAGNFGGEELDDDEPDS
KKWRKDGGDGEAASVGGNRTVREPRVVVQTMSDIDVLDDGYRWRKYGQKVVKGNPNPRSY
YKCTTARCPVRKHVERACHDARAVVTTYEGKHNHDVPPARGSSASLYRAALAAQQAAGYH
QHGFGAGSSHGAFCGGGAPTQAAETGGFSMSGFGNTVGTAFSYPSQQQQQQQSQAMYYAA
PSAKDELRDDMSFFEQPLLF
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacgccggggagctttggaacgccggcgaactccggacccgtggcgctctcg
ttcgcggccagctccttcgccggctttctcggcggcccggcttctggcggagaagcagac
agcagcgggctgtccaagttcaaggccatgccgccgccgtccctcccgctgtcgcacccg
ccggcgtcgccgtcgtcgttcctcaacgcgttctccggcttcctcgactcgccgatcctc
ctgacgcccagcttgttcccgtcgccgacgacgggcgccatcccgtcggagcccttcaac
tggatgggcacgggggagaacctgcaggccggcgtaaaggatgagcagcggcagtacacc
gacttcacgttccagacggcggcggcgtccgtgccggagacggtggccggagccgcgcag
caggcggcgtcctttccgcaatcgtcgtccatgctgatggcgccattgggtggacttgga
gattcgtacaacggcgcgctgcagcaacagcagccatggagctaccaggagcccacagca
caattcgaggcgccgtcgtcggcggcgagggcgcagcctgacatgctcgggaacggcggc
tacaccgccgtgcccgcggcggtgccgggcttccgcgagcagagcaaccggccgccgtcg
gacgacggctacaactggcgcaagtacgggcagaagaacatgaaagggagcgagaacccg
cgcagctactacaagtgcagcttccccggctgcccgaccaagaagaaggtggagcggtcg
ccggacgggcaagtcacggagatcgtgtacaagggcacgcacaaccatcccaagccgcag
agcacgcgccggaactccagctcggccccggcggcgccggcgtcggcgtcgtcgtacgtg
ctgcagagcgccagcgacgcggcggcggagcactccttcggcggcgcgctgtccggcacg
cccgcggcgacgcccgagaactcgtcggggtcctacggggacgacgagatcaacggcgtg
agctcgcggctcgccggtaacttcggcggcgaggagctcgacgacgatgaacccgactcc
aagaaatggaggaaagacggcggcgacggcgaggcggcctcggtgggcggcaaccggacg
gtgcgggagccgagggtcgtcgtgcagacgatgagcgacatcgacgtcctggacgacggc
taccggtggcgcaagtacgggcagaaggtggtgaagggcaacccgaacccgcggagctac
tacaagtgcacgacggcgaggtgccccgtgcggaagcacgtggagcgcgcgtgccacgac
gcgcgcgccgtggtcaccacctacgagggcaagcacaaccacgacgtgccccccgcgcgc
ggcagcagcgcctcgctctaccgcgccgcgctggcggcgcagcaggccgcgggctaccac
cagcacggcttcggcgccggcagcagccacggcgcgttctgcggcggcggcgcgccgacg
caggccgcggagaccggcggcttctccatgtccggcttcggcaacacggtgggcacggcg
ttctcttacccgagccagcagcagcagcagcagcagagccaggcgatgtactacgccgcc
ccatcagccaaggacgagctacgagacgacatgtcgtttttcgagcagccattgctgttc
tga
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