KEGG   Panicum virgatum (switchgrass): 120698421
Entry
120698421         CDS       T07260                                 
Name
(RefSeq) SAC3 family protein A-like isoform X1
  KO
K23802  SAC3 family protein LENG8/THP3
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120698421
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120698421
SSDB
Motif
Pfam: SAC3_GANP CSN8_PSD8_EIF3K
Other DBs
NCBI-GeneID: 120698421
NCBI-ProteinID: XP_039837948
LinkDB
Position
3K:22761091..22770465
AA seq 967 aa
MEQTNPSPYPPLSSSQQPWSSASGSVSVSWNNQVDKPSQDTVYYDPQRDVSVAGGNQNVG
SNVPYSAQSSMGMADASHSHVPYSSSVQHSYNPVEYANYYYGYPQAANDSSVHQGANQHP
GAAYQPLTSFQNSGSYIDPTSNTYYNAGGHQTVPGYGSSSYYYQNNTWDSGSSGNNYTQS
YQNYSSSDTNALQSSTSMPANSVPYQQQYNQWPYYYNQSVPSASSNPVAGNSTADNVAVN
TPAGYSYPSSQPPPPGTTSWKINSVASVAPPMQAPGVSGPQNQYANQAQDHHANQAPGVQ
WSQNHYAYQAQAYSQKTMNSNHAPLGNPEDPQRTVDPIGRSSNTLLNHVSENFQPNLQGS
MTTNTSSESKIQIPTNPRIAPGFSMVIPKSEKKNLGPDLSKKPAYVSVSMPTNDAKATQV
GHDARSIPFSLRNYTMRNLNRCKDDAQRAACRCIMEEITRKAIADGTLLTKNWDTEPLLP
LPESVVGTTEASSANHSSLFSSTPTPRKRVKSRWEPAVDETVTNKVEQIAKGLFNSNIHN
SFEPKNRTGSSWDHGKFIQSHQASLNKVNQRPAKKQKFTSNSSQIQNGNASSDSDKEQDL
TKYYASATALANSPEEKKRREHRSKRFERCQDSSLKSRNSSANKDAIANMHRRNAVSSYL
SRTYEEGTRAVEDMDWDALTIKGTCQEIEKNYLRLTSAPDPSIVRPEEVLEKALAIVETS
QKNYFYKCDQLKSIRQDLTVQRIQNELTVKVYETHARLAMQAGDLPEYNQCQSQLKRLYA
EGIKGCYFEFSAYNLLCVMLHSNNKRDLLSSMASLSKEAKQDAAVKHALAVHSAVSSGNY
VQFFKLYKRAPNLNSCLMDLYVERMRFEAMKCMSRSYRPTLPVGYAVQILGFVRTDSEGC
MADGDDGVEECEKWLKAHGTVLSVDNSGELQIDMKASSATLYMPEPENAVAHGDASLAVD
DFLARTS
NT seq 2904 nt   +upstreamnt  +downstreamnt
atggaacagacaaatccatctccttatccacctctatcttccagtcagcaaccatggtcc
tcggccagtgggtcagtatcagtttcatggaataaccaagtggataaacctagccaggat
acagtttactatgatccacaaagggatgtatcagttgcaggagggaatcaaaatgtaggt
agcaatgtgccttattctgcccagtcgagtatggggatggcagatgcatctcactctcat
gtgccttactccagttcagttcaacatagctacaatcctgtagaatatgccaactattat
tatggctacccacaagctgcaaatgattcttctgtccaccaaggagcaaaccaacatcca
ggtgcagcttatcagcctcttacttcatttcaaaattcagggtcttacattgatcccaca
agtaacacatattacaatgctgggggtcatcagactgtgccaggatatggaagcagcagc
tactactatcagaacaacacatgggattctggaagctcaggaaataattatactcaatcg
taccaaaactactcttcgtctgatacaaatgcactccagagttccacttcaatgcctgcc
aattccgtaccatatcagcagcagtataaccagtggccgtactattacaatcaatctgtg
ccaagtgcttctagtaatccagttgctggaaacagtactgcagataatgtagcagttaac
acccctgctggttattcctatccatctagccagccacctccaccaggcacgacgtcatgg
aaaattaattcagttgcttctgttgcacctccaatgcaggctccaggtgtttcaggacct
caaaatcaatacgctaaccaggcacaagatcatcatgccaaccaggcgccaggtgttcaa
tggtctcaaaaccattatgcctaccaggcacaggcatactctcagaagactatgaattcg
aatcatgcacctctaggcaacccggaagatccgcagaggaccgtagaccctataggtcga
agctcgaatactttgttgaaccatgtttctgaaaattttcaaccaaacttgcagggttcc
atgacaacaaatacttccagcgaaagcaaaatacagattccaaccaatcctcgaattgct
cctggtttctccatggtgataccgaagagtgagaagaaaaatttaggacctgatttatcc
aagaagcctgcctatgttagcgtctccatgccaacaaatgatgctaaagcaactcaagtt
ggtcatgatgctagatctatcccattttcactccgtaattatactatgaggaacctcaat
cgttgtaaagatgatgcccaaagggctgcctgccgatgtataatggaagagatcacaaga
aaagctatcgctgatggaacccttcttactaagaattgggatactgaaccactactccct
ttgccagaaagtgttgtgggcacaactgaggcaagcagtgcaaaccattcaagtctcttc
tcatcaacacctaccccaaggaaacgtgtgaaaagtaggtgggagcctgctgtggatgaa
acagttaccaataaggtggaacaaatagcaaaaggattgttcaacagtaatatacacaat
tccttcgaacctaaaaatagaacgggtagcagttgggatcacgggaagtttatccagtct
caccaagcatctttaaacaaagtcaatcagaggccggccaagaagcaaaaattcactagt
aattcaagtcaaatacagaatggaaacgcttcaagtgacagtgataaggagcaggatcta
accaaatattatgccagtgcaactgcactagcaaattcaccagaggaaaagaaacgcagg
gagcatagatctaagcgttttgaaaggtgtcaggattcatcattaaaatcaaggaactct
tctgcaaataaagatgcaattgctaatatgcatagaagaaatgcagtttcttcttatctt
agtagaacttacgaagaaggcactagagctgtggaggatatggattgggatgccctgaca
atcaagggaacatgtcaggaaattgagaaaaactatctacggcttacatcggcacctgat
ccttccatagtaaggcctgaagaagtcctggagaaggcccttgcaattgttgaaacatct
caaaagaattatttttacaagtgtgatcaattaaaatctattcgccaagatcttacagtt
cagagaatccagaatgaactaactgtaaaggtatacgaaactcacgcccgtttagcaatg
caagctggcgatttacctgaatataaccagtgccagtcgcaactgaagaggttatacgca
gaaggaatcaagggttgctattttgaattttctgcttacaatttgctctgtgtcatgctg
cactctaataataaacgagacttgctgtcatcaatggcgagcttatcaaaagaagccaaa
caagatgcagctgttaagcatgcccttgcagttcattctgccgtttcatctggcaattat
gtccaattttttaaactatacaagagggcacccaatttgaactcgtgcctcatggatctg
tatgtggagcggatgcgctttgaagccatgaaatgcatgtctagatcatatcgcccaact
ttacctgtgggatatgctgtgcagattttgggattcgtgagaacagatagtgaaggttgt
atggctgatggggatgatggtgtagaagaatgcgagaaatggttgaaagcgcatggaaca
gttctttcagtagataacagtggagaattgcagatagatatgaaggcttcttctgccaca
ctttacatgccagagccagagaatgctgttgcacatggtgatgcatcacttgccgttgat
gactttttggcacggacatcgtaa

DBGET integrated database retrieval system