Panicum virgatum (switchgrass): 120698444
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Entry
120698444 CDS
T07260
Name
(RefSeq) probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic isoform X1
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00740
Riboflavin metabolism
pvir00790
Folate biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
120698444
00790 Folate biosynthesis
120698444
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
120698444
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
120698444
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
120698444
NCBI-ProteinID:
XP_039837994
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Position
3K:22935140..22938263
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AA seq
547 aa
AA seq
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MDCVLLSSHLASHNFVNTRFQQGFSGLNSIGFAVIRKGCLKLRCYALGDELGGSGQVNQP
FNKSNNGPIFQGLNASGTSFRTFGAEITQETGDFFVSDAEGDPDKPTDGFSSIDQAINAL
REGKFVIAVDDENGDNEGDLVMAATLVNPESIAFMIRNGSGIISVGMKEEDLTRLMIPMM
SPITEIEDISTAASTVTVDARAGISTGVSAADRAKTIFTLASPDSKPSDLRRPGHIFPLK
YRNGGVLKRAGHTEASVDLVALAGLRPVSVLSTVMDPNDGSMAGMTVLQQMAMEHDIPIV
SITDLIRYRRKREKLVELIAVSRLPTKWGLFRAYCYQSKLEGTEHIAVVKVVSAFCNFSC
SQGDISNGEDVLVRVHSECLTGDILGSARCDCGNQLDLALELIEKAGRGVLVYLRGHEGR
GIGLGQKLRAYNLQDEGHDTVEANVELGLAVDAREYGIGAQILRDIGVRTMRLMTNNPAK
FIGLKGYGLAVVGRVPVISPITKENQKYLETKRTKMGHVYGSDLPGSLPGLANPQDTAAD
KADDTQN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgtcctcttgagctctcacttggcatctcacaattttgttaacacaaggttt
cagcaaggctttagtggtctcaacagtataggatttgcagtcatcagaaagggatgctta
aaattaaggtgctatgctcttggtgatgaacttggtggttcagggcaagtaaatcaacca
tttaacaaaagcaataatggacctattttccaaggactcaatgcatcaggcacttctttt
cgaacttttggtgcggaaatcactcaggaaacaggagatttcttcgtgagtgatgcagag
ggtgacccggacaaacctaccgatggtttctcttcaatagaccaggcgataaatgctttg
cgtgaaggaaagtttgtcattgctgtagatgatgaaaacggtgataacgaaggggatctt
gtcatggcagccactctagtgaacccggagtcaattgcattcatgatcaggaatggttct
ggaattatctcagtaggcatgaaagaagaggatttaacaagattgatgattcctatgatg
tccccaatcacagagatcgaagacatttcaactgctgcttccacagtaacagtggatgca
agagcgggtatatctactggtgtctccgctgcagatagagcaaaaaccatctttacttta
gcctcccctgattcgaaacccagtgatctcagacgaccaggccatatattccccctcaag
taccgaaatggaggcgtgctgaaaagagctgggcatacagaagcatcagttgatcttgtc
gcattggcgggtttgcgtcctgtatctgtcctatccacggtcatggacccaaacgatggt
tcgatggcaggcatgacagtcctgcaacagatggctatggaacacgatataccgatcgtt
tcaatcactgatctcatccggtatagaagaaagcgagagaaactggtggagctgattgcg
gtgtctcgcttgccaacgaaatggggcctcttccgggcttattgctaccaatccaagctc
gaaggaactgagcacattgctgttgtgaaggtggtctcagcgttctgcaacttctcatgc
tcgcagggcgatatcagcaacggcgaagacgtcctcgtgagggtgcactcggaatgcctg
acgggcgacatcctcggctctgcccgctgcgactgcggcaaccagctggacctggcgctg
gagctcatcgaaaaggccggccgtggcgtgctcgtgtacctccgcggccacgagggccgc
ggcatcggcctgggccagaagctccgggcctacaacctgcaggacgagggccacgacacc
gtcgaggcgaacgtcgagctcggcctcgccgtcgacgcgcgcgagtacggcatcggcgcc
cagatactccgtgacatcggcgtgcgcacgatgcggctgatgaccaacaacccggccaag
ttcatcgggctcaagggctacggcctcgccgtggtggggagggtgccggtgatctccccg
atcaccaaggagaaccagaagtacctcgagacgaagcggaccaagatggggcacgtctac
ggctccgacctccctggcagcctgccggggctcgccaatccgcaagacaccgccgctgac
aaagcagacgatacccaaaactga
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